RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 MBTPS2O43462 519 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 CSPG5O95196 566 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 SMC2O95347 1197 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 NFICP08651 508 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 KLRC2P26717 231 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 BRCC3P46736 316 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 CLCN4P51793 760 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 MCCD1P59942 119 aaPredicted RBP13.09□□□□□ -0.31
HPS1-206ENST00000462743 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
HPS1-206ENST00000462743 PNOCQ13519 176 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 C9orf57Q5W0N0 161 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 SMRP1Q8NCR6 262 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 MFSD14AQ96MC6 490 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 DZANK1Q9NVP4 752 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
HPS1-206ENST00000462743 MTRRQ9UBK8 725 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 DPP7Q9UHL4 492 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 PCDHA5Q9Y5H7 936 aa13.09□□□□□ -0.31
HPS1-206ENST00000462743 SPTBN5Q9NRC6 3674 aaKnown RBP13.08□□□□□ -0.32
HPS1-206ENST00000462743 C2CD2LO14523 706 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 CLIC2O15247 247 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 MAPK13O15264 365 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
HPS1-206ENST00000462743 KCNQ1P51787 676 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 WNT7BP56706 349 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 LILRA4P59901 499 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 RBM10P98175 930 aaKnown RBP13.08□□□□□ -0.32
HPS1-206ENST00000462743 RAB33AQ14088 237 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
HPS1-206ENST00000462743 PTCRAQ6ISU1 281 aaPredicted RBP13.08□□□□□ -0.32
HPS1-206ENST00000462743 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 CBWD2Q8IUF1 395 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 APPL2Q8NEU8 664 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 CXorf38Q8TB03 319 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 HASPINQ8TF76 798 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 SUSD6Q92537 303 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 BORCS6Q96GS4 357 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 B3GALT6Q96L58 329 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 OXCT2Q9BYC2 517 aaPredicted RBP13.08□□□□□ -0.32
HPS1-206ENST00000462743 PLEKHA4Q9H4M7 779 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 PDE11AQ9HCR9 933 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 INTS13Q9NVM9 706 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
HPS1-206ENST00000462743 H7C4K7 107 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 PRPF40AO75400 957 aaKnown RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 OAZ2O95190 189 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 EPCAMP16422 314 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 TYMPP19971 482 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 TKTP29401 623 aaKnown RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 GUCY2FP51841 1108 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 CLDN10P78369 228 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 ITIH3Q06033 890 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 CYP24A1Q07973 514 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 PSMD6Q15008 389 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 PSMD5Q16401 504 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 PRSS55Q6UWB4 352 aaPredicted RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 EP400NLQ6ZTU2 488 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 CEP57Q86XR8 500 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 CMASQ8NFW8 434 aaPredicted RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 ADAM7Q9H2U9 754 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
HPS1-206ENST00000462743 MYO10Q9HD67 2058 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 PRUNE2Q8WUY3 3088 aa13.07□□□□□ -0.32
HPS1-206ENST00000462743 DOCK6Q96HP0 2047 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 ARHGEF37A1IGU5 675 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 I3L4J1 428 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 PPEF2O14830 753 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 TGM5O43548 720 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 CALUO43852 315 aaPredicted RBP13.06□□□□□ -0.32
HPS1-206ENST00000462743 EXOC3O60645 756 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 GLUD1P00367 558 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 CYP11A1P05108 521 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 MCM4P33991 863 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 CA8P35219 290 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 CYP2J2P51589 502 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 TFAMQ00059 246 aaKnown RBP13.06□□□□□ -0.32
HPS1-206ENST00000462743 ENPEPQ07075 957 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 ZCWPW2Q504Y3 356 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
HPS1-206ENST00000462743 CENPPQ6IPU0 288 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 WDR49Q8IV35 697 aa13.06□□□□□ -0.32
HPS1-206ENST00000462743 LRRC52Q8N7C0 313 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms