RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 PODXLO00592 558 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 PTGESO14684 152 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 LPXNO60711 386 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 STAU1O95793 577 aaKnown RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 NFICP08651 508 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 FAM163BP0C2L3 166 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 PIK3CAP42336 1068 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 TAF6P49848 677 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 YWHAEP62258 255 aaKnown RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 MYL7Q01449 175 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 UBE3AQ05086 875 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 DSC1Q08554 894 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 NCOA4Q13772 614 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 IQCB1Q15051 598 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 ZACNQ401N2 412 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 KCNT2Q6UVM3 1135 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 SV2AQ7L0J3 742 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 DPH6Q7L8W6 267 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 LUZP1Q86V48 1076 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 GSTCDQ8NEC7 633 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 APPL2Q8NEU8 664 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 ANP32BQ92688 251 aaKnown RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 CLP1Q92989 425 aaKnown RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 SLC35C1Q96A29 364 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 IQCDQ96DY2 449 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 MTMR12Q9C0I1 747 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 LIMA1Q9UHB6 759 aaKnown RBP11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 MEIS3P2A8K0S8 358 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 KIF4AO95239 1232 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 ITGB3P05106 788 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 GALTP07902 379 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 ZNF18P17022 549 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 RFX1P22670 979 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 BMPR1AP36894 532 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 GCLMP48507 274 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 FMO5P49326 533 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 BCAR1P56945 870 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 TNNC1P63316 161 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 LSM11P83369 360 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 CREMQ03060 361 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 NCAPHQ15003 741 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 UPP1Q16831 310 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 EXOC3L4Q17RC7 722 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 C9orf57Q5W0N0 161 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 PPP2R2DQ66LE6 453 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 PDE12Q6L8Q7 609 aaKnown RBP11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 KIAA1841Q6NSI8 718 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 DSTYKQ6XUX3 929 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 METTL23Q86XA0 190 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 COLGALT2Q8IYK4 626 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 GPR65Q8IYL9 337 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 SPATA18Q8TC71 538 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 PPP2R3CQ969Q6 453 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 HPDLQ96IR7 371 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 NRDE2Q9H7Z3 1164 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 MMRN2Q9H8L6 949 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 RNF19AQ9NV58 838 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 RAB20Q9NX57 234 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 ADAM28Q9UKQ2 775 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 LZTS1Q9Y250 596 aa11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
SMNDC1-203ENST00000460483 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 CASTOR2A6NHX0 329 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 KPNA7A9QM74 516 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 PIRO00625 290 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 NRP1O14786 923 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 SYN3O14994 580 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 HUS1O60921 280 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 C4BPAP04003 597 aaKnown RBP11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 TPM1P09493 284 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 ODC1P11926 461 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 TBXAS1P24557 533 aaPredicted RBP11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 POLR2BP30876 1174 aaKnown RBP11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 CTNNB1P35222 781 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 CLCNKBP51801 687 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 UBASH3AP57075 661 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 PLCB3Q01970 1234 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 KRT31Q15323 416 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 PTPROQ16827 1216 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 ZNF699Q32M78 642 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 ZNF667Q5HYK9 610 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 IRF2BP1Q8IU81 584 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 C1orf127Q8N9H9 656 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 RNF214Q8ND24 703 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 JAKMIP2Q96AA8 810 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 MED15Q96RN5 788 aa11.85□□□□□ -0.51
SMNDC1-203ENST00000460483 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms