RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, human

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-215	ENST00000460158	RRP1B	Q14684	758 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	R3HDM1	Q15032	1099 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	ANO6	Q4KMQ2	910 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	HTR3D	Q70Z44	454 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	MED25	Q71SY5	747 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	CHST15	Q7LFX5	561 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	DAAM2	Q86T65	1068 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	PPP1R3B	Q86XI6	285 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	FAM90A1	Q86YD7	464 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	ZFPM1	Q8IX07	1006 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	PALM2	Q8IXS6	379 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	IL17RD	Q8NFM7	739 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	CCDC136	Q96JN2	1154 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	NT5C1B	Q96P26	610 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	C1orf43	Q9BWL3	253 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	VPS11	Q9H270	941 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	FAM30A	Q9NZY2	134 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	STAP2	Q9UGK3	403 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	PCDHA1	Q9Y5I3	950 aa		4.22	□□□□□ -1.73
VPS8-215	ENST00000460158	KRTAP23-1	A1A580	65 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	GOLGA6L6	A8MZA4	724 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	FAM227A	F5H4B4	570 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	TPP1	O14773	563 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	PRC1	O43663	620 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	SLC43A1	O75387	559 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	PRSS23	O95084	383 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	AHSG	P02765	367 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	ITGB1	P05556	798 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	FTH1P19	P0C7X4	201 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	ALAS1	P13196	640 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	MGAT1	P26572	445 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	APOBEC3A	P31941	199 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	AGFG1	P52594	562 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	NHLH2	Q02577	135 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	CRHR2	Q13324	411 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	PRKD1	Q15139	912 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	METRNL	Q641Q3	311 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	NAIF1	Q69YI7	327 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	CYB5RL	Q6IPT4	315 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	SWSAP1	Q6NVH7	229 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	KIAA0319L	Q8IZA0	1049 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	CELF5	Q8N6W0	485 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	FAM156A	Q8NDB6	213 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	FAM167A	Q96KS9	214 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	NEU1	Q99519	415 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	MRPL46	Q9H2W6	279 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	WDCP	Q9H6R7	721 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	FAM204A	Q9H8W3	233 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	SLAMF7	Q9NQ25	335 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	SLC52A1	Q9NWF4	448 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	SLC45A2	Q9UMX9	530 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	TESMIN	Q9Y4I5	508 aa		4.21	□□□□□ -1.74
VPS8-215	ENST00000460158	CDHR4	A6H8M9	788 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PRSS29P	A6NIE9	313 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	GRXCR1	A8MXD5	290 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	MUSK	O15146	869 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PLSCR1	O15162	318 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PEX14	O75381	377 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	HAUS5	O94927	633 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	ZBED1	O96006	694 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	ACRV1	P26436	265 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PHKA1	P46020	1223 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	CNGB1	Q14028	1251 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	FGL2	Q14314	439 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	CNN3	Q15417	329 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	CCDC93	Q567U6	631 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	UTP14C	Q5TAP6	766 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	CCDC149	Q6ZUS6	474 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	SRGAP1	Q7Z6B7	1085 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	TBC1D15	Q8TC07	691 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	TNPO1	Q92973	898 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	MTFMT	Q96DP5	389 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PACSIN1	Q9BY11	444 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PCED1A	Q9H1Q7	454 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	ZMAT3	Q9HA38	289 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	ATP6V0A4	Q9HBG4	840 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	SIDT1	Q9NXL6	827 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	JKAMP	Q9P055	326 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	CPA4	Q9UI42	421 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	PCDHA6	Q9UN73	950 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	L1RE1	Q9UN81	338 aa		4.2	□□□□□ -1.74
VPS8-215	ENST00000460158	CAPN8	A6NHC0	703 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	ZNF185	O15231	689 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	AGFG2	O95081	481 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	MATN4	O95460	622 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	HRG	P04196	525 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	RHCE	P18577	417 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	HDC	P19113	662 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	PIK3CG	P48736	1102 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	RNASE9	P60153	205 aa	Known RBP	4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	NOMO3	P69849	1222 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	RHD	Q02161	417 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	RALBP1	Q15311	655 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	NOMO2	Q5JPE7	1267 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	KHDC1L	Q5JSQ8	128 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	SPDYA	Q5MJ70	313 aa		4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS8-215	ENST00000460158	ZNF365	Q70YC5	407 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms