RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 ENPEPQ07075 957 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 ELAVL2Q12926 359 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 CAMK1Q14012 370 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 USP41Q3LFD5 358 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 C9orf57Q5W0N0 161 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 PDE12Q6L8Q7 609 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 TTI2Q6NXR4 508 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 CD300LGQ6UXG3 332 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 DSTYKQ6XUX3 929 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 USP37Q86T82 979 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 WDR49Q8IV35 697 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 C3orf58Q8NDZ4 430 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 PLEKHO2Q8TD55 490 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 PARD3BQ8TEW8 1205 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 AUTS2Q8WXX7 1259 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 DOCK6Q96HP0 2047 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 B3GALT6Q96L58 329 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 CGRRF1Q99675 332 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 DUSP9Q99956 384 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 VN1R3Q9BXE9 311 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 MTMR12Q9C0I1 747 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 NGRNQ9NPE2 291 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 MRPL17Q9NRX2 175 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 PCDHGC5Q9Y5F6 944 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 PTPRJQ12913 1337 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ANO9A1A5B4 782 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 LRRIQ3A6PVS8 624 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 PIRO00625 290 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 PPEF2O14830 753 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 FSCN2O14926 492 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 FGFR1OPO95684 399 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 SOD2P04179 222 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ITGB3P05106 788 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 URODP06132 367 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 CTSAP10619 480 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 POLR2BP30876 1174 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 VAMP7P51809 220 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 DLG4P78352 724 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 CLDN10P78369 228 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 BIRC3Q13489 604 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 NFKBIBQ15653 356 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 CCDC40Q4G0X9 1142 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 INTS8Q75QN2 995 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 TRAPPC11Q7Z392 1133 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 FILIP1Q7Z7B0 1213 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 MRPL43Q8N983 215 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 C1orf127Q8N9H9 656 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 HERC2P3Q9BVR0 1158 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 GZF1Q9H116 711 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ZBP1Q9H171 429 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 NSUN3Q9H649 340 aaKnown RBP11.72□□□□□ -0.53
CCDC12-204ENST00000460035 TLE6Q9H808 572 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 MMRN2Q9H8L6 949 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ITGA11Q9UKX5 1188 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 C2orf16Q68DN1 1984 aa11.72□□□□□ -0.53
CCDC12-204ENST00000460035 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.71□□□□□ -0.53
CCDC12-204ENST00000460035 HIDE1A8MVS5 230 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 PER2O15055 1255 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 SLC16A3O15427 465 aaKnown RBP11.71□□□□□ -0.53
CCDC12-204ENST00000460035 CLSTN1O94985 981 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 LETM1O95202 739 aaPredicted RBP11.71□□□□□ -0.53
CCDC12-204ENST00000460035 PAX3P23760 479 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 GLUD2P49448 558 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 AARSP49588 968 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC12-204ENST00000460035 TAF6P49848 677 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 AP3M2P53677 418 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 LILRA4P59901 499 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 BFSP1Q12934 665 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 TRPC3Q13507 836 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 TCEAL5Q5H9L2 206 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 TCERG1LQ5VWI1 586 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 EP400NLQ6ZTU2 488 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 ADGRD2Q7Z7M1 963 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 GPR65Q8IYL9 337 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 TTPALQ9BTX7 342 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.53
CCDC12-204ENST00000460035 SSX2IPQ9Y2D8 614 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 IRAK3Q9Y616 596 aa11.71□□□□□ -0.53
CCDC12-204ENST00000460035 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
CCDC12-204ENST00000460035 IKBKBO14920 756 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms