RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 DNAH12Q6ZR08 3092 aa17.51■□□□□ 0.39
CAPN13-203ENST00000458085 CYP1A1P04798 512 aaPredicted RBP17.5■□□□□ 0.39
CAPN13-203ENST00000458085 MCF2P10911 925 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 MARCKSL1P49006 195 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 MESDQ14696 234 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
CAPN13-203ENST00000458085 SCARA5Q6ZMJ2 495 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF564Q8TBZ8 553 aaPredicted RBP17.5■□□□□ 0.39
CAPN13-203ENST00000458085 ACTRT1Q8TDG2 376 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 SIX4Q9UIU6 781 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 NOC2LQ9Y3T9 749 aaKnown RBP17.5■□□□□ 0.39
CAPN13-203ENST00000458085 MTA2O94776 668 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 WEE2P0C1S8 567 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF132P52740 706 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 TRPC3Q13507 836 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 JADE1Q6IE81 842 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 RUFY4Q6ZNE9 571 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF677Q86XU0 584 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 C1orf127Q8N9H9 656 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 KRT35Q92764 455 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 KRT12Q99456 494 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 AP1M1Q9BXS5 423 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 NIF3L1Q9GZT8 377 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 ADAMTS10Q9H324 1103 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 CNOT8Q9UFF9 292 aaKnown RBP17.5■□□□□ 0.39
CAPN13-203ENST00000458085 POLIQ9UNA4 740 aa17.5■□□□□ 0.39
CAPN13-203ENST00000458085 ERLIN1O75477 346 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 IGHA2P01877 340 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 TNNC2P02585 160 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 COMTP21964 271 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 BPIFB4P59827 614 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 SGSM1Q2NKQ1 1148 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF699Q32M78 642 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 SLC10A6Q3KNW5 377 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF394Q53GI3 561 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 C11orf63Q6NUN7 778 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 MCOLN2Q8IZK6 566 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 RASGEF1CQ8N431 466 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ANKRD36BP1Q96IX9 119 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 TRIM7Q9C029 511 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
CAPN13-203ENST00000458085 TUBBP07437 444 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ITGA4P13612 1032 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 RGS2P41220 211 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ASPAP45381 313 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF211Q13398 564 aaPredicted RBP17.49■□□□□ 0.39
CAPN13-203ENST00000458085 C8orf74Q6P047 294 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 AADACL2Q6P093 401 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 CCNI2Q6ZMN8 369 aaPredicted RBP17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ZSWIM1Q9BR11 485 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.49■□□□□ 0.39
CAPN13-203ENST00000458085 SELENOOQ9BVL4 669 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 CXCL16Q9H2A7 254 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ZFYVE28Q9HCC9 887 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 ST7Q9NRC1 585 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
CAPN13-203ENST00000458085 TRIP11Q15643 1979 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 ZSCAN5CA6NGD5 496 aaPredicted RBP17.48■□□□□ 0.39
CAPN13-203ENST00000458085 RRN3P2A6NIE6 340 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 PGRMC1O00264 195 aaKnown RBP17.48■□□□□ 0.39
CAPN13-203ENST00000458085 MAP2K7O14733 419 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 THAP12O43422 761 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 GPR32O75388 356 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 IL18RAPO95256 599 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 KRT19P08727 400 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 RRM1P23921 792 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 GUCY2FP51841 1108 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 CENPCQ03188 943 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 MFSD10Q14728 455 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 CXorf38Q8TB03 319 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 GDAP1L1Q96MZ0 367 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 APBA2Q99767 749 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 ARHGAP39Q9C0H5 1083 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 TLL2Q9Y6L7 1015 aa17.48■□□□□ 0.39
CAPN13-203ENST00000458085 ERLIN2O94905 339 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 GLI1P08151 1106 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 RAP1GAPP47736 663 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 NOMO3P69849 1222 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF410Q86VK4 478 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 ZNF606Q8WXB4 792 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 OSMRQ99650 979 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 NXF1Q9UBU9 619 aaKnown RBP17.47■□□□□ 0.39
CAPN13-203ENST00000458085 NR2E1Q9Y466 385 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 NRCAMQ92823 1304 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
CAPN13-203ENST00000458085 ATP8B1O43520 1251 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 MYL3P08590 195 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 HOXA11P31270 313 aaPredicted RBP17.47■□□□□ 0.39
CAPN13-203ENST00000458085 MON1BQ7L1V2 547 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 KRT222Q8N1A0 295 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 STIM2Q9P246 746 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 CITO14578 2027 aa17.47■□□□□ 0.39
CAPN13-203ENST00000458085 ITGB3P05106 788 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 CYP2C9P11712 490 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 BRD2P25440 801 aaKnown RBP17.46■□□□□ 0.39
CAPN13-203ENST00000458085 PSEN2P49810 448 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 INHBEP58166 350 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms