RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 GRAMD1AQ96CP6 724 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 NIF3L1Q9GZT8 377 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 PRMT7Q9NVM4 692 aaPredicted RBP12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 IRAK4Q9NWZ3 460 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 FAM8A1Q9UBU6 413 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 DPYSL4O14531 572 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 P4HA2O15460 535 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 HBP1O60381 514 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 SLC25A27O95847 323 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 RALAP11233 206 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 CAP2P40123 477 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 VEPH1Q14D04 833 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 NTRK3Q16288 839 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 IMPG1Q17R60 797 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 SMTNL2Q2TAL5 461 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 SNX19Q92543 992 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 ERP44Q9BS26 406 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 DUSP10Q9Y6W6 482 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 RNF103-CHMP3A0A140T963 221 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 EXTL3O43909 919 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 E2F6O75461 281 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 ERFP50548 548 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 UBA3Q8TBC4 463 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 CERKQ8TCT0 537 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 KBTBD4Q9NVX7 518 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 HACL1Q9UJ83 578 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 TBX20Q9UMR3 447 aa12.34□□□□□ -0.43
SMARCAD1-204ENST00000457823 FOXP2O15409 715 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 ARP10275 920 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 STMN1P16949 149 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 CASP4P49662 377 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 NLRP11P59045 1033 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 RAD51Q06609 339 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 SZRD1Q7Z422 152 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 USP33Q8TEY7 942 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 MED15Q96RN5 788 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 PRMT1Q99873 361 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 ICAM1P05362 532 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 COBLL1Q53SF7 1204 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 SYN2Q92777 582 aaPredicted RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 AIPL1Q9NZN9 384 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 ANP32DO95626 131 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 HADHAP40939 763 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 CAPRIN1Q14444 709 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 CBWD2Q8IUF1 395 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 RAET1EQ8TD07 263 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 ARHGEF26Q96DR7 871 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 ECT2Q9H8V3 914 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 CHMP2BQ9UQN3 213 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 TECPR2O15040 1411 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 CCDC22O60826 627 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 TADA2AO75478 443 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 CHN1P15882 459 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 ERVK-24P63145 666 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 RUBCNQ92622 972 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 PABPC5Q96DU9 382 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 KLF6Q99612 283 aaPredicted RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 MMTAG2Q9BU76 263 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 THAP2Q9H0W7 228 aa12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 MAP3K20Q9NYL2 800 aaKnown RBP12.33□□□□□ -0.44
SMARCAD1-204ENST00000457823 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 HMBSP08397 361 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 TCF7P36402 384 aaPredicted RBP12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 INPP1P49441 399 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 DCAF6Q58WW2 860 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 GNASQ5JWF2 1037 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 C3orf62Q6ZUJ4 267 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 TTC30BQ8N4P2 665 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 HPDLQ96IR7 371 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 CLMNQ96JQ2 1002 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCAD1-204ENST00000457823 XPO7Q9UIA9 1087 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms