RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TKTP29401 623 aaKnown RBP3.15□□□□□ -1.91
LINC02540-201ENST00000455554 BMS1Q14692 1282 aaKnown RBP3.15□□□□□ -1.91
LINC02540-201ENST00000455554 FSCN1Q16658 493 aaKnown RBP3.15□□□□□ -1.91
LINC02540-201ENST00000455554 TXNRD1Q16881 649 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.15□□□□□ -1.91
LINC02540-201ENST00000455554 SUMO4Q6EEV6 95 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 CNNM4Q6P4Q7 775 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 FKBP9P1Q75LS8 142 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 NEK8Q86SG6 692 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 SYNPOQ8N3V7 929 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 OR2W6PQ8NHA6 318 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 SLC30A5Q8TAD4 765 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 DENND1AQ8TEH3 1009 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 CASKIN2Q8WXE0 1202 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 LPIN2Q92539 896 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 RAX2Q96IS3 184 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 PGBD1Q96JS3 809 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 MYOCQ99972 504 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 LDAHQ9H6V9 325 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 EMC7Q9NPA0 242 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 TMEM140Q9NV12 185 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 TMEM260Q9NX78 707 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 AJAP1Q9UKB5 411 aaPredicted RBP3.15□□□□□ -1.91
LINC02540-201ENST00000455554 PADI4Q9UM07 663 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 ST3GAL5Q9UNP4 418 aa3.15□□□□□ -1.91
LINC02540-201ENST00000455554 PRAMEF33A0A0G2JMD5 474 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 CDHR4A6H8M9 788 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 CYSRT1A8MQ03 144 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 PRAMEF10O60809 474 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 LATS1O95835 1130 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 FCER1AP12319 257 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 EPHB2P29323 1055 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 CCT2P78371 535 aaKnown RBP3.14□□□□□ -1.91
LINC02540-201ENST00000455554 SLFN5Q08AF3 891 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 PDCD1Q15116 288 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 SEPT7Q16181 437 aaKnown RBP3.14□□□□□ -1.91
LINC02540-201ENST00000455554 TMEM119Q4V9L6 283 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 AWAT2Q6E213 333 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 TSHZ1Q6ZSZ6 1077 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 RASAL3Q86YV0 1011 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 PPM1KQ8N3J5 372 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 TBC1D15Q8TC07 691 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 HOXB13Q92826 284 aaPredicted RBP3.14□□□□□ -1.91
LINC02540-201ENST00000455554 GSTO2Q9H4Y5 243 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 RBM12Q9NTZ6 932 aaKnown RBP3.14□□□□□ -1.91
LINC02540-201ENST00000455554 CD2APQ9Y5K6 639 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 ACTL7AQ9Y615 435 aa3.14□□□□□ -1.91
LINC02540-201ENST00000455554 H3BNC9 293 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 CD1AP06126 327 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 ENPP1P22413 925 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 GATA3P23771 443 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 CERS1P27544 350 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 POLGP54098 1239 aaPredicted RBP3.13□□□□□ -1.91
LINC02540-201ENST00000455554 RPS7P62081 194 aaKnown RBP3.13□□□□□ -1.91
LINC02540-201ENST00000455554 FPGSQ05932 587 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 ADRM1Q16186 407 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 NFE2L2Q16236 605 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 SLC44A4Q53GD3 710 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 YTHDF3Q7Z739 585 aaKnown RBP3.13□□□□□ -1.91
LINC02540-201ENST00000455554 CLNKQ7Z7G1 428 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 AHI1Q8N157 1196 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 MYCBPAPQ8TBZ2 947 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 TSPEARQ8WU66 669 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 FATE1Q969F0 183 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 ACAP3Q96P50 834 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 GREM2Q9H772 168 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 ANLNQ9NQW6 1124 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 SCOCQ9UIL1 159 aa3.13□□□□□ -1.91
LINC02540-201ENST00000455554 PPEF2O14830 753 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 INSIG1O15503 277 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 URI1O94763 535 aaPredicted RBP3.12□□□□□ -1.91
LINC02540-201ENST00000455554 KCNA2P16389 499 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 PCSK1P29120 753 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 RAPGEF1Q13905 1077 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 TCEA2Q15560 299 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 TKFCQ3LXA3 575 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 MUM1L1Q5H9M0 696 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 ZNF66Q6ZN08 573 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 AUTS2Q8WXX7 1259 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 FEZ1Q99689 392 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 TOPORSQ9NS56 1045 aaPredicted RBP3.12□□□□□ -1.91
LINC02540-201ENST00000455554 MTMR4Q9NYA4 1195 aa3.12□□□□□ -1.91
LINC02540-201ENST00000455554 VSX1Q9NZR4 365 aaPredicted RBP3.12□□□□□ -1.91
LINC02540-201ENST00000455554 RUVBL1Q9Y265 456 aaKnown RBP3.12□□□□□ -1.91
LINC02540-201ENST00000455554 TCRBV7S2A1N4TA0A589 114 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 WDR27A2RRH5 827 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 KIAA0391O15091 583 aaKnown RBP3.11□□□□□ -1.91
LINC02540-201ENST00000455554 GPR32O75388 356 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 ENDOD1O94919 500 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 TTLL1O95922 423 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 SNHG28P0DPA3 235 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 MPGP29372 298 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 MRPS9P82933 396 aaKnown RBP3.11□□□□□ -1.91
LINC02540-201ENST00000455554 PPP3CAQ08209 521 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 CD300EQ496F6 205 aaPredicted RBP3.11□□□□□ -1.91
LINC02540-201ENST00000455554 ATP13A4Q4VNC1 1196 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 NINJ1Q92982 152 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 MRFAP1L1Q96HT8 127 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 RNPC3Q96LT9 517 aaKnown RBP3.11□□□□□ -1.91
LINC02540-201ENST00000455554 TARS2Q9BW92 718 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms