RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 AP1G2O75843 785 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 CHRNA3P32297 505 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 KRT76Q01546 638 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 PDIA2Q13087 525 aaKnown RBP11.85□□□□□ -0.51
DDR1-240ENST00000454612 ZBTB41Q5SVQ8 909 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 DCAF15Q66K64 600 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 RBBP8NLQ8NC74 664 aaPredicted RBP11.85□□□□□ -0.51
DDR1-240ENST00000454612 MTMR12Q9C0I1 747 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 GDF3Q9NR23 364 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 PARP2Q9UGN5 583 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
DDR1-240ENST00000454612 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 O00370 1275 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 OPLAHO14841 1288 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 PHF2O75151 1096 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 ICAM1P05362 532 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 PPP2R5CQ13362 524 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 RCN2Q14257 317 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 ASTE1Q2TB18 679 aaPredicted RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 MDH1BQ5I0G3 518 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 TMC3Q7Z5M5 1100 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 TTC17Q96AE7 1141 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 XPO6Q96QU8 1125 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 LRRC4CQ9HCJ2 640 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 AGO4Q9HCK5 861 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 PIH1D1Q9NWS0 290 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 CCDC195A0A1B0GUA6 201 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 MIF4GDA9UHW6 222 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDR1-240ENST00000454612 SPIRE1Q08AE8 756 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 OVGP1Q12889 678 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 NCOA4Q13772 614 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 KRT81Q14533 505 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 ZNF568Q3ZCX4 644 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 UBAP2Q5T6F2 1119 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 ZBTB8OSQ8IWT0 167 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 IQCKQ8N0W5 287 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 MKL1Q969V6 931 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDR1-240ENST00000454612 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 A6NNZ2 444 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 MRPS9P82933 396 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 STXBP2Q15833 593 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 TUBB8Q3ZCM7 444 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 C6orf118Q5T5N4 469 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
DDR1-240ENST00000454612 ELP3Q9H9T3 547 aa11.84□□□□□ -0.51
DDR1-240ENST00000454612 KAT6AQ92794 2004 aa11.83□□□□□ -0.51
DDR1-240ENST00000454612 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PFDN1O60925 122 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 RNF8O76064 485 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 TNNC2P02585 160 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 VIL1P09327 827 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 KCNA3P22001 575 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 CIITAP33076 1130 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PTGER2P43116 358 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PGM5Q15124 567 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 ARMC3Q5W041 872 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 DARS2Q6PI48 645 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 MOB2Q70IA6 237 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 TMEM130Q8N3G9 435 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 GMCL1P1Q8NEA9 526 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 EPS8L1Q8TE68 723 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 VTI1AQ96AJ9 217 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 KREMEN1Q96MU8 473 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 RIT2Q99578 217 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 TMEM121Q9BTD3 319 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 OSBPL8Q9BZF1 889 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 CDC42EP4Q9H3Q1 356 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 GOLGA4Q13439 2230 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 PODXLO00592 558 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 EIF3DO15371 548 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDR1-240ENST00000454612 CCNE2O96020 404 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 CLCN3P51790 818 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PSMC1P62191 440 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 EMC2Q15006 297 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 ZNF699Q32M78 642 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 DAW1Q8N136 415 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PRELID2Q8N945 189 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 ACTRT1Q8TDG2 376 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 BSNDQ8WZ55 320 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 ATXN7L3BQ96GX2 97 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 RILPQ96NA2 401 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 TGS1Q96RS0 853 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 AS3MTQ9HBK9 375 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
DDR1-240ENST00000454612 JAK3P52333 1124 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 LY6KQ17RY6 165 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 PYROXD1Q8WU10 500 aa11.83□□□□□ -0.52
DDR1-240ENST00000454612 MIEF2Q96C03 454 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms