RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 LNX1Q8TBB1 728 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-203ENST00000452013 HDAC7Q8WUI4 952 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PIK3R5Q8WYR1 880 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 DHTKD1Q96HY7 919 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-203ENST00000452013 SUSD3Q96L08 255 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 MFSD14AQ96MC6 490 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 ASB2Q96Q27 587 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 OXCT2Q9BYC2 517 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PDE11AQ9HCR9 933 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PRDM6Q9NQX0 595 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 LMBRD1Q9NUN5 540 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 INTS13Q9NVM9 706 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 BACE2Q9Y5Z0 518 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 WDR81Q562E7 1941 aa9.6□□□□□ -0.87
COL8A1-203ENST00000452013 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 I3L4J1 428 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 M0QZQ0 153 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 CETN3O15182 167 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 MAPK13O15264 365 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 TEX28O15482 410 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 LINC01565O15544 149 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 IGFBP6P24592 240 aaPredicted RBP9.59□□□□□ -0.87
COL8A1-203ENST00000452013 LTBRP36941 435 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 PRCPP42785 496 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 TAF6P49848 677 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 LILRA4P59901 499 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 KCNC3Q14003 757 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 PSMD5Q16401 504 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 CAMK4Q16566 473 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 EDRF1Q3B7T1 1238 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 SV2CQ496J9 727 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 TJAP1Q5JTD0 557 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 RTP2Q5QGT7 225 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 CEP135Q66GS9 1140 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 ISM2Q6H9L7 571 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 ANKRD54Q6NXT1 300 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 LLGL2Q6P1M3 1020 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 METTL23Q86XA0 190 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 EFCAB13Q8IY85 973 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 ADSSL1Q8N142 457 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 TRIML1Q8N9V2 468 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 SLC22A17Q8WUG5 538 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 ERCC4Q92889 916 aaPredicted RBP9.59□□□□□ -0.87
COL8A1-203ENST00000452013 CCDC127Q96BQ5 260 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 B3GALT6Q96L58 329 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 ZNF560Q96MR9 790 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 DZANK1Q9NVP4 752 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 KIAA1468Q9P260 1216 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 CD207Q9UJ71 328 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 MAN1B1Q9UKM7 699 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 ITGA11Q9UKX5 1188 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 DSEQ9UL01 958 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 AGAP1Q9UPQ3 857 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 HCFC2Q9Y5Z7 792 aa9.59□□□□□ -0.87
COL8A1-203ENST00000452013 LOXHD1Q8IVV2 1947 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 KPNA7A9QM74 516 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 PSMA7O14818 248 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 PHACTR2O75167 634 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 GLUD1P00367 558 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 ITGB3P05106 788 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 KRT19P08727 400 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 DLATP10515 647 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 ODC1P11926 461 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 KRT13P13646 458 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 TYMPP19971 482 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 NR2F2P24468 414 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 TKTP29401 623 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 PSMC2P35998 433 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 AARSP49588 968 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 CLCN4P51793 760 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 FKBP3Q00688 224 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 TFF2Q03403 129 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 YWHAHQ04917 246 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 ENPEPQ07075 957 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 MYO1EQ12965 1108 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 RAB33AQ14088 237 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 MORC3Q14149 939 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 MRPL58Q14197 206 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 VARS2Q5ST30 1063 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 CENPPQ6IPU0 288 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 CES5AQ6NT32 575 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 PALB2Q86YC2 1186 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 THEM5Q8N1Q8 247 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 LRRC52Q8N7C0 313 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 PARD3BQ8TEW8 1205 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 ANP32BQ92688 251 aaKnown RBP9.58□□□□□ -0.88
COL8A1-203ENST00000452013 MSLNLQ96KJ4 702 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 SENP8Q96LD8 212 aa9.58□□□□□ -0.88
COL8A1-203ENST00000452013 CGRRF1Q99675 332 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms