RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 POMCP01189 267 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 MTHFD1P11586 935 aaKnown RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 MGAT1P26572 445 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 HTR1BP28222 390 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 PRDX5P30044 214 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 TOB2Q14106 344 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 UBXN2BQ14CS0 331 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 FAM102AQ5T9C2 384 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 CHST15Q7LFX5 561 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 UBE3BQ7Z3V4 1068 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 KIAA0319LQ8IZA0 1049 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 KLHDC4Q8TBB5 520 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 PPM1EQ8WY54 764 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 CDK5RAP1Q96SZ6 601 aaKnown RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 WDCPQ9H6R7 721 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZNF703Q9H7S9 590 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 SPON1Q9HCB6 807 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 MAN1C1Q9NR34 630 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 AURKAIP1Q9NWT8 199 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 CEP72Q9P209 647 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 PNMA2Q9UL42 364 aa5.53□□□□□ -1.52
HMGB1P48-201ENST00000446155 A0A088AWK7 358 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 PRSS29PA6NIE9 313 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 TRIM24O15164 1050 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 HRGP04196 525 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 MYBP10242 640 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 ALAS1P13196 640 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 SLC6A2P23975 617 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 CHN2P52757 468 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 USP14P54578 494 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 PLS1Q14651 629 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 ATP2B3Q16720 1220 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 ARHGAP29Q52LW3 1261 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 SPDYAQ5MJ70 313 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 PALM2Q8IXS6 379 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 PGBD4Q96DM1 585 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 TERF2IPQ9NYB0 399 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 JKAMPQ9P055 326 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 ABCF2Q9UG63 623 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 DAAM1Q9Y4D1 1078 aa5.52□□□□□ -1.53
HMGB1P48-201ENST00000446155 ANO9A1A5B4 782 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 AHRRA9YTQ3 701 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 KIAA0391O15091 583 aaKnown RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 HAUS5O94927 633 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PRSS23O95084 383 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 MATN4O95460 622 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 FGAP02671 866 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PHKG2P15735 406 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 GCSHP23434 173 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 APOBEC3AP31941 199 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 HTR3AP46098 478 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 RAB1AP62820 205 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 NHLH2Q02577 135 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 CREMQ03060 361 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 SLFN5Q08AF3 891 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 RAPGEF1Q13905 1077 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 ANO6Q4KMQ2 910 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 COBLL1Q53SF7 1204 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 AGAP9Q5VTM2 703 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 SWSAP1Q6NVH7 229 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 NPNTQ6UXI9 565 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZNF365Q70YC5 407 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PRRT2Q7Z6L0 340 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PPP1R3BQ86XI6 285 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 CAMKK1Q8N5S9 505 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 NLGN4YQ8NFZ3 816 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 UBE2Q2Q8WVN8 375 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 EXTL1Q92935 676 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 SLC35A4Q96G79 324 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 STRBPQ96SI9 672 aaKnown RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 C1orf43Q9BWL3 253 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 MRPL46Q9H2W6 279 aaKnown RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 GSTO2Q9H4Y5 243 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PPCSQ9HAB8 311 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PTPRHQ9HD43 1115 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 PNPOQ9NVS9 261 aa5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 FEZ2Q9UHY8 353 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P48-201ENST00000446155 FAM227AF5H4B4 570 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 ITGB1P05556 798 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZFP36P26651 326 aaKnown RBP5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 SLC25A3Q00325 362 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 POU5F1BQ06416 359 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 CRHR2Q13324 411 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 CNGB1Q14028 1251 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 SAFBQ15424 915 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 INO80DQ53TQ3 878 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 CCDC93Q567U6 631 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 EMC10Q5UCC4 262 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 RNF207Q6ZRF8 634 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 MED25Q71SY5 747 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 MORC1Q86VD1 984 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 COL23A1Q86Y22 540 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 RHOT2Q8IXI1 618 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 FAM43AQ8N2R8 423 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 NAP1L4Q99733 375 aaKnown RBP5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 PACSIN1Q9BY11 444 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms