RNA–Protein interactions for RNA: ENST00000444798.1

CACFD1-203, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 5

Gene CACFD1, Length 356 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-203ENST00000444798 C9orf57Q5W0N0 161 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 SLFN12LQ6IEE8 588 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 APBB1IPQ7Z5R6 666 aaPredicted RBP13.36□□□□□ -0.27
CACFD1-203ENST00000444798 RSPH1Q8WYR4 309 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 BORCS6Q96GS4 357 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 MED15Q96RN5 788 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
CACFD1-203ENST00000444798 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
CACFD1-203ENST00000444798 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
CACFD1-203ENST00000444798 SF3B1O75533 1304 aaKnown RBP eCLIP13.36□□□□□ -0.27
CACFD1-203ENST00000444798 MYH10P35580 1976 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 PIRO00625 290 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 NR3C1P04150 777 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 URODP06132 367 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 OR4Q2P0C623 313 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 POLR2BP30876 1174 aaKnown RBP13.35□□□□□ -0.27
CACFD1-203ENST00000444798 NDUFV1P49821 464 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 UBE2HP62256 183 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 TFAMQ00059 246 aaKnown RBP13.35□□□□□ -0.27
CACFD1-203ENST00000444798 DCLRE1AQ6PJP8 1040 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 PALB2Q86YC2 1186 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 C12orf56Q8IXR9 622 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACFD1-203ENST00000444798 SUSD3Q96L08 255 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 S1PR5Q9H228 398 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 RXFP1Q9HBX9 757 aa13.35□□□□□ -0.27
CACFD1-203ENST00000444798 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
CACFD1-203ENST00000444798 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
CACFD1-203ENST00000444798 NCOR1O75376 2440 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
CACFD1-203ENST00000444798 MBTPS2O43462 519 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 TBC1D4O60343 1298 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 RFPL2O75678 378 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 ITGB3P05106 788 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 SCP2P22307 547 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 MCM4P33991 863 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 PSMD5Q16401 504 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 SNRNP35Q16560 246 aaKnown RBP13.34□□□□□ -0.27
CACFD1-203ENST00000444798 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
CACFD1-203ENST00000444798 ANKRD54Q6NXT1 300 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 OSTM1Q86WC4 334 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 TTC9BQ8N6N2 239 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 SMRP1Q8NCR6 262 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 TTPALQ9BTX7 342 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 COL25A1Q9BXS0 654 aaPredicted RBP13.34□□□□□ -0.27
CACFD1-203ENST00000444798 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
CACFD1-203ENST00000444798 DPP3Q9NY33 737 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
CACFD1-203ENST00000444798 ANAPC1Q9H1A4 1944 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 TGM5O43548 720 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 AKAP3O75969 853 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 MYL1P05976 194 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 SP100P23497 879 aaPredicted RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 LILRA4P59901 499 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 PSMD2Q13200 908 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 MORC3Q14149 939 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 LILRA6Q6PI73 481 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 POTEHQ6S545 545 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 GUF1Q8N442 669 aaKnown RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 XXYLT1Q8NBI6 393 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 CCDC127Q96BQ5 260 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 MFSD14AQ96MC6 490 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 UROC1Q96N76 676 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 CRISPLD1Q9H336 500 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 ASB7Q9H672 318 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 MAN1C1Q9NR34 630 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 SLC38A7Q9NVC3 462 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 MTRRQ9UBK8 725 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 C2CD2Q9Y426 696 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.28
CACFD1-203ENST00000444798 TRIOO75962 3097 aa13.33□□□□□ -0.28
CACFD1-203ENST00000444798 PATJQ8NI35 1801 aa13.32□□□□□ -0.28
CACFD1-203ENST00000444798 WDR27A2RRH5 827 aa13.32□□□□□ -0.28
CACFD1-203ENST00000444798 M0QZQ0 153 aa13.32□□□□□ -0.28
CACFD1-203ENST00000444798 IL18RAPO95256 599 aa13.32□□□□□ -0.28
CACFD1-203ENST00000444798 SEC24AO95486 1093 aa13.32□□□□□ -0.28
CACFD1-203ENST00000444798 VNN1O95497 513 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms