RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PSMD5Q16401 504 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 PUS10Q3MIT2 529 aaKnown RBP18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 C9orf57Q5W0N0 161 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 PRSS55Q6UWB4 352 aaPredicted RBP18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 RDH13Q8NBN7 331 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 VN1R2Q8NFZ6 395 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 SPATA20Q8TB22 786 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 ERCC4Q92889 916 aaPredicted RBP18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 PDE11AQ9HCR9 933 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 FNIP2Q9P278 1114 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 CD207Q9UJ71 328 aa18.89■□□□□ 0.61
SMARCAL1-209ENST00000444508 SYN3O14994 580 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 NR3C1P04150 777 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 TMEM191BP0C7N4 346 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 PAX3P23760 479 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 TKTP29401 623 aaKnown RBP18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 KCNQ1P51787 676 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 WNT7BP56706 349 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 KCNC3Q14003 757 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 CLUL1Q15846 466 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 TJAP1Q5JTD0 557 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 ZNF658Q5TYW1 1059 aaPredicted RBP18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 TMEM184AQ6ZMB5 413 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 SMYD4Q8IYR2 804 aaPredicted RBP18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 TMEM130Q8N3G9 435 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 DZANK1Q9NVP4 752 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 CLEC1BQ9P126 229 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 FAM50BQ9Y247 325 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 VWA8A3KMH1 1905 aa18.88■□□□□ 0.61
SMARCAL1-209ENST00000444508 SPDYE4A6NLX3 237 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 RPL17P18621 184 aaKnown RBP18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 CLCN4P51793 760 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 MYBPC2Q14324 1141 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 ANKRD54Q6NXT1 300 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 ELMSAN1Q6PJG2 1045 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 DSTYKQ6XUX3 929 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 ANKS3Q6ZW76 656 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 GLYCTKQ8IVS8 523 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 APPL2Q8NEU8 664 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 LNX1Q8TBB1 728 aaPredicted RBP18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 SLC22A17Q8WUG5 538 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 ANKRD36BP1Q96IX9 119 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 FNBP1Q96RU3 617 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 DPP7Q9UHL4 492 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 PCDHB8Q9UN66 801 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 TRAF3IP3Q9Y228 551 aa18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 R3HCC1Q9Y3T6 440 aaKnown RBP18.87■□□□□ 0.61
SMARCAL1-209ENST00000444508 ANO9A1A5B4 782 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 GOLGA6L22H0YM25 854 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 H7C4K7 107 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 PIRO00625 290 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 PPEF2O14830 753 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 GLUD1P00367 558 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 TNNC2P02585 160 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 EPCAMP16422 314 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 HOXB8P17481 243 aaPredicted RBP18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 LILRA4P59901 499 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 CYP24A1Q07973 514 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 PSMD6Q15008 389 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 PTCRAQ6ISU1 281 aaPredicted RBP18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 WDR49Q8IV35 697 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 TMEM174Q8WUU8 243 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 CCDC127Q96BQ5 260 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 MSLNLQ96KJ4 702 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 ZNF560Q96MR9 790 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 DMAC2Q9NW81 257 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 ITGA11Q9UKX5 1188 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 FRMD4BQ9Y2L6 1034 aa18.86■□□□□ 0.61
SMARCAL1-209ENST00000444508 ARHGEF37A1IGU5 675 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 M0QZQ0 153 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 DLATP10515 647 aaKnown RBP18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 TNNI1P19237 187 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 RPL13P26373 211 aaKnown RBP18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 PNPLA4P41247 253 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 AARSP49588 968 aaKnown RBP eCLIP18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 TAF6P49848 677 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 SMAD4Q13485 552 aaKnown RBP18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 STIM1Q13586 685 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 DUOXA2Q1HG44 320 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 VARS2Q5ST30 1063 aaKnown RBP18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 LMBRD2Q68DH5 695 aaPredicted RBP18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 PALB2Q86YC2 1186 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 C1orf127Q8N9H9 656 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 MTMR12Q9C0I1 747 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 INTS13Q9NVM9 706 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 MTRRQ9UBK8 725 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 BACE2Q9Y5Z0 518 aa18.85■□□□□ 0.61
SMARCAL1-209ENST00000444508 C1RP00736 705 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 ITGB3P05106 788 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 KRT19P08727 400 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 ODC1P11926 461 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 BMP1P13497 986 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 NR2F2P24468 414 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 POLR2BP30876 1174 aaKnown RBP18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 PRCPP42785 496 aa18.84■□□□□ 0.61
SMARCAL1-209ENST00000444508 NFIL3Q16649 462 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms