RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ANKRD20A4Q4UJ75 823 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 MFSD4BQ5TF39 518 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 DCAF12L1Q5VU92 463 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PDIK1LQ8N165 341 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 SREK1Q8WXA9 508 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 TCEAL9Q9UHQ7 104 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ADGRA3Q8IWK6 1321 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 XPO1O14980 1071 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 UQCRBP14927 111 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CEBPAP49715 358 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 MPP3Q13368 585 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ZC2HC1CQ53FD0 456 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 RCOR2Q8IZ40 523 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 DQX1Q8TE96 717 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 PRPF31Q8WWY3 499 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 ATP6V0A1Q93050 837 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 UTP6Q9NYH9 597 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 HIF1AQ16665 826 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 USP17L2Q6R6M4 530 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CTAGE3PQ8IX95 158 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 C10orf88Q9H8K7 445 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TBCCD1Q9NVR7 557 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 SLC24A2Q9UI40 661 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 USTQ9Y2C2 406 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 SMIM22K7EJ46 135 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 DNAJC6O75061 913 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 EFHC1Q5JVL4 640 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ACAP3Q96P50 834 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 KLF6Q99612 283 aaPredicted RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 EBF3Q9H4W6 596 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 S100A14Q9HCY8 104 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PIK3CDO00329 1044 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 INHBAP08476 426 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PCYT1AP49585 367 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CDK16Q00536 496 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 RINLQ6ZS11 566 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 VGLL2Q8N8G2 317 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 GIPC3Q8TF64 312 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 PTCD3Q96EY7 689 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 CFAP36Q96G28 342 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 SERPINI1Q99574 410 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 FERMT1Q9BQL6 677 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 VPS11Q9H270 941 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ERVK-5Q9HDB9 667 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TSC22D4Q9Y3Q8 395 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 C15orf38-AP3S2A0A0A6YYH1 394 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TRIM49P0CI25 452 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TRIM49CP0CI26 452 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 C3orf62Q6ZUJ4 267 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ARPINQ7Z6K5 226 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 POTEB3A0JP26 581 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 CYP26A1O43174 497 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 TOM1L1O75674 476 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 LDHCP07864 332 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 NUP107P57740 925 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 ART3Q13508 389 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 KLHL38Q2WGJ6 581 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 RARS2Q5T160 578 aaKnown RBP5.29□□□□□ -1.56
HERC1-201ENST00000443617 POTEBQ6S5H4 581 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 C10orf82Q8WW14 230 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 DNAJC19Q96DA6 116 aa5.29□□□□□ -1.56
HERC1-201ENST00000443617 FLT1P17948 1338 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ANKRD63C9JTQ0 380 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 RXRBP28702 533 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CA8P35219 290 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 IL6STP40189 918 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 HSPA13P48723 471 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SPDYAQ5MJ70 313 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CLEC4GQ6UXB4 293 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ZBED8Q8IZ13 594 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 RSAD2Q8WXG1 361 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MAK16Q9BXY0 300 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 LRRC4BQ9NT99 713 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 USP1O94782 785 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MYL2P10916 166 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PKN2Q16513 984 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 WDR72Q3MJ13 1102 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TTC17Q96AE7 1141 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CNBD2Q96M20 576 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 IQANK1A0A1B0GTG1 560 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 LPXNO60711 386 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 FGRP09769 529 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 GZMAP12544 262 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MUTP22033 750 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ALDH1A3P47895 512 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MGAT5Q09328 741 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 C1QTNF12Q5T7M4 302 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 KAZNQ674X7 775 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MARCH10Q8NA82 808 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 DIS3LQ8TF46 1054 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 ARHGEF26Q96DR7 871 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ABHD8Q96I13 439 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 COPEO14579 308 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CFLARO15519 480 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 YY1P25490 414 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PMLP29590 882 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ARSEP51690 589 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms