RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 COG5Q9UP83 839 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 MED24O75448 989 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 PSMC6P62333 389 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 PPP2R5CQ13362 524 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 P3H1Q32P28 736 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 CFAP157Q5JU67 520 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 VPS52Q8N1B4 723 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 NPHS2Q9NP85 383 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 TAS2R14Q9NYV8 317 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 DCTN4Q9UJW0 460 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 NUMBLQ9Y6R0 609 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 COMMD3-BMI1R4GMX3 469 aa17.81■□□□□ 0.44
PMS1-213ENST00000441310 CFAP69A5D8W1 941 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 FAM47DPA6NHR8 397 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 KRT18P05783 430 aaKnown RBP17.8■□□□□ 0.44
PMS1-213ENST00000441310 COILP38432 576 aaPredicted RBP17.8■□□□□ 0.44
PMS1-213ENST00000441310 IZUMO2Q6UXV1 221 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 RIBC1Q8N443 379 aaPredicted RBP17.8■□□□□ 0.44
PMS1-213ENST00000441310 C10orf82Q8WW14 230 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 NMD3Q96D46 503 aaKnown RBP17.8■□□□□ 0.44
PMS1-213ENST00000441310 BCAS3Q9H6U6 928 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 VPS41P49754 854 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 PABPC4Q13310 644 aaKnown RBP eCLIP17.8■□□□□ 0.44
PMS1-213ENST00000441310 THOC5Q13769 683 aaKnown RBP17.8■□□□□ 0.44
PMS1-213ENST00000441310 Q4G0T1 1027 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 ANKRD23Q86SG2 305 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 SCFD1Q8WVM8 642 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 RPL26L1Q9UNX3 145 aaKnown RBP17.8■□□□□ 0.44
PMS1-213ENST00000441310 SIPA1L1O43166 1804 aa17.8■□□□□ 0.44
PMS1-213ENST00000441310 TRAFD1O14545 582 aaPredicted RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 GYG2O15488 501 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 TTC4O95801 387 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 TMEM253P0C7T8 217 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 PDCD7Q8N8D1 485 aaKnown RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 DNAJC1Q96KC8 554 aaKnown RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 HAPLN3Q96S86 360 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 ADAM33Q9BZ11 813 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 METTL14Q9HCE5 456 aaKnown RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 EMILIN3Q9NT22 766 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 PLA2G4BP0C869 781 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 STAT1P42224 750 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 MARSP56192 900 aaKnown RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 SEL1L2Q5TEA6 688 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 SPATA24Q86W54 205 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 SNRNP27Q8WVK2 155 aaKnown RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 TLE6Q9H808 572 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 GSC2O15499 205 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 CHMP2AO43633 222 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 OPHN1O60890 802 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 CHRNB2P17787 502 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 CTNNA2P26232 953 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 DGKZQ13574 1117 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.79■□□□□ 0.44
PMS1-213ENST00000441310 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
PMS1-213ENST00000441310 STX18Q9P2W9 335 aaKnown RBP17.79■□□□□ 0.44
PMS1-213ENST00000441310 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
PMS1-213ENST00000441310 CDK7P50613 346 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 GSTA3Q16772 222 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 CLNKQ7Z7G1 428 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 PALB2Q86YC2 1186 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 ANKRD35Q8N283 1001 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 UBL4BQ8N7F7 174 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 MPP4Q96JB8 637 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 IWS1Q96ST2 819 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 BMP2KQ9NSY1 1161 aaPredicted RBP17.78■□□□□ 0.44
PMS1-213ENST00000441310 ARL8BQ9NVJ2 186 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 NCANO14594 1321 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 CCDC22O60826 627 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 EDF1O60869 148 aaKnown RBP17.78■□□□□ 0.44
PMS1-213ENST00000441310 ALAS1P13196 640 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 SERPINB3P29508 390 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 STAT2P52630 851 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 SFSWAPQ12872 951 aaKnown RBP17.78■□□□□ 0.44
PMS1-213ENST00000441310 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 NR1H4Q96RI1 486 aaPredicted RBP17.78■□□□□ 0.44
PMS1-213ENST00000441310 BTBD10Q9BSF8 475 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 YIPF2Q9BWQ6 316 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 KCTD10Q9H3F6 313 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 ZBTB21Q9ULJ3 1066 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 ADGRA3Q8IWK6 1321 aa17.78■□□□□ 0.44
PMS1-213ENST00000441310 ASMTLO95671 621 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 EGFRP00533 1210 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 ITGA2BP08514 1039 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 PYGMP11217 842 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 ZNF568Q3ZCX4 644 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 MARK2Q7KZI7 788 aaKnown RBP17.77■□□□□ 0.44
PMS1-213ENST00000441310 GMCL1P1Q8NEA9 526 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 C1orf54Q8WWF1 131 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 MRRFQ96E11 262 aaKnown RBP17.77■□□□□ 0.44
PMS1-213ENST00000441310 C9orf72Q96LT7 481 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 CYTH2Q99418 400 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 SIX2Q9NPC8 291 aa17.77■□□□□ 0.44
PMS1-213ENST00000441310 GRID1Q9ULK0 1009 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms