RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MESDQ14696 234 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 ZNF699Q32M78 642 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 C17orf99Q6UX52 265 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 MON1BQ7L1V2 547 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 CDR2LQ86X02 465 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 PHF13Q86YI8 300 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 KIAA0319LQ8IZA0 1049 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 ALG3Q92685 438 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 VCPIP1Q96JH7 1222 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 NAP1L3Q99457 506 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-202ENST00000439724 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 SLITRK6Q9H5Y7 841 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 ASB7Q9H672 318 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 RALGAPA2Q2PPJ7 1873 aa12.58□□□□□ -0.4
SMAD3-202ENST00000439724 TMEM110-MUSTN1A8MSY1 372 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 KRIT1O00522 736 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 RAD51CO43502 376 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 TSPAN1O60635 241 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 GLI1P08151 1106 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 EPHB4P54760 987 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 OSTNP61366 133 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CDC42EP1Q00587 391 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 PPP2R5EQ16537 467 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 NAA35Q5VZE5 725 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 RGMBQ6NW40 437 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 EMBQ6PCB8 327 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 TMEM192Q8IY95 271 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 EIF1ADQ8N9N8 165 aaKnown RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 NLRP7Q8WX94 980 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 FLRT1Q9NZU1 646 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 NRCAMQ92823 1304 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 A0A1B0GUA9 196 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CCDC66A2RUB6 948 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 LACTBL1A8MY62 500 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 MEFVO15553 781 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 THAP12O43422 761 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 ERLIN2O94905 339 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CLSTN1O94985 981 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 IGHA2P01877 340 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 FGGP02679 453 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 NFICP08651 508 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 SLC10A3P09131 477 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 HSPA6P17066 643 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CTNNA1P35221 906 aaKnown RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 ASPAP45381 313 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 PEX5P50542 639 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 INHBEP58166 350 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 GABPB1Q06547 395 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 GPS2Q13227 327 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 LIN9Q5TKA1 542 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 SAPCD2Q86UD0 394 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 TLK2Q86UE8 772 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 KLHL7Q8IXQ5 586 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 GSPT2Q8IYD1 628 aaKnown RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 SOCS4Q8WXH5 440 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CPA5Q8WXQ8 436 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 KRT35Q92764 455 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CAVIN3Q969G5 261 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CPB2Q96IY4 423 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 SCLT1Q96NL6 688 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 PPP1R16BQ96T49 567 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CISHQ9NSE2 258 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 SETD4Q9NVD3 440 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CHORDC1Q9UHD1 332 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-202ENST00000439724 Q9Y3F1 56 aa12.57□□□□□ -0.4
SMAD3-202ENST00000439724 CITO14578 2027 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 MROH7Q68CQ1 1323 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SMIM35A0A1B0GVV1 85 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 MBLAC1A4D2B0 266 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SPOPO43791 374 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 CSDE1O75534 798 aaKnown RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 LSM8O95777 96 aaKnown RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SMIM10L2AP0DMW4 78 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SMIM10L2BP0DMW5 78 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 RRM1P23921 792 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 OAS2P29728 719 aaKnown RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 ATICP31939 592 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 RGS2P41220 211 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 SLC1A1P43005 524 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 TNNT3P45378 269 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 MARCKSL1P49006 195 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
SMAD3-202ENST00000439724 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 PAK2Q13177 524 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 NNTQ13423 1086 aa12.56□□□□□ -0.4
SMAD3-202ENST00000439724 PCBP1Q15365 356 aaKnown RBP eCLIP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms