RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DRICH1Q6PGQ1 229 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 C1orf228Q6PIY5 440 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 PPP1R32Q7Z5V6 425 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 SKAP1Q86WV1 359 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 GIMAP8Q8ND71 665 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 SHCBP1Q8NEM2 672 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 NLGN4YQ8NFZ3 816 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 POF1BQ8WVV4 589 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 TCF25Q9BQ70 676 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 HERPUD2Q9BSE4 406 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 NELFAQ9H3P2 528 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF287Q9HBT7 754 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 PNPLA8Q9NP80 782 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 FBXO34Q9NWN3 711 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 CPA4Q9UI42 421 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 OGDHLQ9ULD0 1010 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 RUVBL1Q9Y265 456 aaKnown RBP3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 PAXBP1Q9Y5B6 917 aa3.87□□□□□ -1.79
HMGB1P27-201ENST00000431429 A0A087WV62 115 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 TCRBV7S2A1N4TA0A589 114 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 MBD3L4A6NDZ8 208 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 MBD3L3A6NE82 208 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 NPIPB6E9PJ23 425 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 E9PLN8 166 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 BTN3A1O00481 513 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 B4GALT4O60513 344 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 PLA2G6O60733 806 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 HAUS5O94927 633 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 PARP1P09874 1014 aaKnown RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 RAP2AP10114 183 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 CR2P20023 1033 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ABCB4P21439 1286 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 FGFR2P21802 821 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 FDXRP22570 491 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 RAC3P60763 192 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 RPS16P62249 146 aaKnown RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 TNFAIP2Q03169 654 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ATP2B3Q16720 1220 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 MPEG1Q2M385 716 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 FAM214AQ32MH5 1076 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 C3orf38Q5JPI3 329 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 METRNLQ641Q3 311 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 HTR3DQ70Z44 454 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 APBB1IPQ7Z5R6 666 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 C1QL4Q86Z23 238 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZFPM1Q8IX07 1006 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ACRBPQ8NEB7 543 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 VPS37AQ8NEZ2 397 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 OR52N2Q8NGI0 321 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 OR6B3Q8NGW1 331 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 CYP2W1Q8TAV3 490 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF384Q8TF68 577 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 SCAMP4Q969E2 229 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 TMEM41AQ96HV5 264 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF512Q96ME7 567 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 DPYSL5Q9BPU6 564 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 VKORC1Q9BQB6 163 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 TTLL2Q9BWV7 592 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 CPEB1Q9BZB8 566 aaKnown RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 CERS4Q9HA82 394 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 CNNM1Q9NRU3 951 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 CFAP97Q9P2B7 532 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC45A2Q9UMX9 530 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 AGAP1Q9UPQ3 857 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 SNX13Q9Y5W8 968 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC30A1Q9Y6M5 507 aa3.86□□□□□ -1.79
HMGB1P27-201ENST00000431429 F5H423 210 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 MT-ND5P03915 603 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ANXA2P07355 339 aaKnown RBP3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 GJB1P08034 283 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ALAS1P13196 640 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 HALP42357 657 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 HSPA7P48741 367 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 PTTG1IPP53801 180 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 PPP2CBP62714 309 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 PPP2CAP67775 309 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLFN5Q08AF3 891 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 CTBP1Q13363 440 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 HABP2Q14520 560 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 UBXN2BQ14CS0 331 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZRSR2Q15696 482 aaKnown RBP3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 VMACQ2NL98 169 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF568Q3ZCX4 644 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF648Q5T619 568 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 TCERG1LQ5VWI1 586 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 C1QL3Q5VWW1 255 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF529Q6P280 563 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 TLDC1Q6P9B6 456 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 FAM111BQ6SJ93 734 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ZNF783Q6ZMS7 281 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 CATSPERGQ6ZRH7 1159 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 PLEKHH3Q7Z736 793 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ATP11CQ8NB49 1132 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 TMIEQ8NEW7 156 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 TNPO1Q92973 898 aaKnown RBP3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ARL8AQ96BM9 186 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 KLHL32Q96NJ5 620 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 PACSIN1Q9BY11 444 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 STK33Q9BYT3 514 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms