RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 SENP6Q9GZR1 1112 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-205ENST00000431183 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 OTOFQ9HC10 1997 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 GARTP22102 1010 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 TMEM132DQ14C87 1099 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 CDO1Q16878 200 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 NOC2LQ9Y3T9 749 aaKnown RBP12.08□□□□□ -0.48
SMPD4-205ENST00000431183 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
SMPD4-205ENST00000431183 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 N4BP1O75113 896 aaKnown RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 LGR5O75473 907 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 ADORA2BP29275 332 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 SLC26A2P50443 739 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CCDC170Q8IYT3 715 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 MIS12Q9H081 205 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 ESYT3A0FGR9 886 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CTAGE15A4D2H0 777 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CTAGE8P0CG41 777 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 VPS41P49754 854 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PSMC1P62191 440 aaKnown RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 TNNC1P63316 161 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 KAZNQ674X7 775 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 MMS22LQ6ZRQ5 1243 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CTAGE6Q86UF2 777 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CTAGE4Q8IX94 777 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 HMGXB4Q9UGU5 601 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PRG3Q9Y2Y8 225 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 MYH10P35580 1976 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 A6NJR5 290 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 MYO1CO00159 1063 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 TSPAN1O60635 241 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 VNN1O95497 513 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CCDC172P0C7W6 258 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 CYP11B1P15538 503 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PBX3P40426 434 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 MLH1P40692 756 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 NSFP46459 744 aaKnown RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PURAQ00577 322 aaKnown RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 SLC35G2Q8TBE7 412 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 RPS6KC1Q96S38 1066 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 STARD7Q9NQZ5 370 aa12.07□□□□□ -0.48
SMPD4-205ENST00000431183 GNEQ9Y223 722 aaKnown RBP12.07□□□□□ -0.48
SMPD4-205ENST00000431183 SNX17Q15036 470 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 DCUN1D2Q6PH85 259 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 ACOT1Q86TX2 421 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 NOA1Q8NC60 698 aaKnown RBP12.06□□□□□ -0.48
SMPD4-205ENST00000431183 C1orf131Q8NDD1 294 aaKnown RBP12.06□□□□□ -0.48
SMPD4-205ENST00000431183 HPDLQ96IR7 371 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 STRA6Q9BX79 667 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 HEMGNQ9BXL5 484 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 NRCAMQ92823 1304 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 CNOT8Q9UFF9 292 aaKnown RBP12.06□□□□□ -0.48
SMPD4-205ENST00000431183 ST3GAL5Q9UNP4 418 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 SLC45A1Q9Y2W3 748 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 RLFQ13129 1914 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 UBE4BO95155 1302 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 ZNFX1Q9P2E3 1918 aaKnown RBP12.06□□□□□ -0.48
SMPD4-205ENST00000431183 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 HOXD10P28358 340 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 CUL2Q13617 745 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 MEA1Q16626 185 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 SLC10A6Q3KNW5 377 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 CEP57Q86XR8 500 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 HAUS1Q96CS2 278 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 UNC80Q8N2C7 3258 aa12.06□□□□□ -0.48
SMPD4-205ENST00000431183 SEPT4O43236 478 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 GRK4P32298 578 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 TMCO2Q7Z6W1 182 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 RNF180Q86T96 592 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 CCDC33Q8N5R6 958 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 SCLYQ96I15 445 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 MTG1Q9BT17 334 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 DPP3Q9NY33 737 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 TJP2Q9UDY2 1190 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 ANAPC7Q9UJX3 599 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 TRIP12Q14669 1992 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 A0A1W2PQJ5 194 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 PI4K2BG5E9Z4 385 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 TLR3O15455 904 aaKnown RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 F2P00734 622 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 PAFAH1B1P43034 410 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 RNASELQ05823 741 aaKnown RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 SNX1Q13596 522 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 ITGA7Q13683 1181 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 ZACNQ401N2 412 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 B4GALNT4Q76KP1 1039 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 BRSK2Q8IWQ3 736 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms