RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PLEKHA4Q9H4M7 779 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 CITO14578 2027 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 RRN3P2A6NIE6 340 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 WEE2P0C1S8 567 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 MCF2P10911 925 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 MESDQ14696 234 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 ZNF699Q32M78 642 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 NAA35Q5VZE5 725 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 LLGL2Q6P1M3 1020 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 CPNE8Q86YQ8 564 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 OSMRQ99650 979 aa17.84■□□□□ 0.45
USHBP1-203ENST00000431146 NRCAMQ92823 1304 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 CYP2C9P11712 490 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 UNGP13051 313 aaPredicted RBP17.83■□□□□ 0.45
USHBP1-203ENST00000431146 SREBF2Q12772 1141 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 LONRF2Q1L5Z9 754 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 SGSM1Q2NKQ1 1148 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 SOCS4Q8WXH5 440 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 ZBTB9Q96C00 473 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 AP5M1Q9H0R1 490 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 XYLT2Q9H1B5 865 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 ADAMTS10Q9H324 1103 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.45
USHBP1-203ENST00000431146 SIX4Q9UIU6 781 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 POLIQ9UNA4 740 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 ALG6Q9Y672 507 aa17.83■□□□□ 0.45
USHBP1-203ENST00000431146 THAP12O43422 761 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 SASH3O75995 380 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 CYP1A2P05177 515 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 PSEN2P49810 448 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 GUCY2FP51841 1108 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 BPIFB4P59827 614 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 ITIH3Q06033 890 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 SLC10A6Q3KNW5 377 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 GSPT2Q8IYD1 628 aaKnown RBP17.83■□□□□ 0.44
USHBP1-203ENST00000431146 C1orf127Q8N9H9 656 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 USP38Q8NB14 1042 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
USHBP1-203ENST00000431146 DNAJB3Q8WWF6 145 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 NIF3L1Q9GZT8 377 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 BCCIPQ9P287 314 aaKnown RBP eCLIP17.83■□□□□ 0.44
USHBP1-203ENST00000431146 RNF14Q9UBS8 474 aa17.83■□□□□ 0.44
USHBP1-203ENST00000431146 CNOT8Q9UFF9 292 aaKnown RBP17.83■□□□□ 0.44
USHBP1-203ENST00000431146 DMGDHQ9UI17 866 aaKnown RBP17.83■□□□□ 0.44
USHBP1-203ENST00000431146 MYADML2A6NDP7 307 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 DDX3YO15523 660 aaKnown RBP17.82■□□□□ 0.44
USHBP1-203ENST00000431146 TREHO43280 583 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 GPR32O75388 356 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 IL18RAPO95256 599 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 RAP1GAPP47736 663 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 CPT1AP50416 773 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 CBX1P83916 185 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 KCTD19Q17RG1 926 aaPredicted RBP17.82■□□□□ 0.44
USHBP1-203ENST00000431146 DCAF12L1Q5VU92 463 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 CYP4F22Q6NT55 531 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 WDR93Q6P2C0 686 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF410Q86VK4 478 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 HOMEZQ8IX15 550 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 UBR7Q8N806 425 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 TRPV1Q8NER1 839 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 CCDC102AQ96A19 550 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 PBKQ96KB5 322 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 CXCL16Q9H2A7 254 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 CISHQ9NSE2 258 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 GABRQQ9UN88 632 aa17.82■□□□□ 0.44
USHBP1-203ENST00000431146 A0A1B0GUA9 196 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 ITGB3P05106 788 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 ASPAP45381 313 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 HADHBP55084 474 aaKnown RBP17.81■□□□□ 0.44
USHBP1-203ENST00000431146 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF677Q86XU0 584 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 AP1M1Q9BXS5 423 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 CNTN6Q9UQ52 1028 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 NOC2LQ9Y3T9 749 aaKnown RBP17.81■□□□□ 0.44
USHBP1-203ENST00000431146 NPTXRO95502 500 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 MYBL2P10244 700 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 MARCKSL1P49006 195 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF211Q13398 564 aaPredicted RBP17.81■□□□□ 0.44
USHBP1-203ENST00000431146 FSCN1Q16658 493 aaKnown RBP17.81■□□□□ 0.44
USHBP1-203ENST00000431146 MCOLN2Q8IZK6 566 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 KRT12Q99456 494 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 SELENOOQ9BVL4 669 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 TRIM7Q9C029 511 aa17.81■□□□□ 0.44
USHBP1-203ENST00000431146 TARSL2A2RTX5 802 aaKnown RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 MBLAC1A4D2B0 266 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 CES2O00748 559 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 CA12O43570 354 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 IGHA2P01877 340 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 CYP1A1P04798 512 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 COMTP21964 271 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 RRM1P23921 792 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 HOXA11P31270 313 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 PSMC4P43686 418 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 NSFP46459 744 aaKnown RBP17.8■□□□□ 0.44
USHBP1-203ENST00000431146 ZNF132P52740 706 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 WDR72Q3MJ13 1102 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 C8orf74Q6P047 294 aa17.8■□□□□ 0.44
USHBP1-203ENST00000431146 CATSPER4Q7RTX7 472 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms