RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 GRM6O15303 877 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 ARHGEF15O94989 841 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 CD58P19256 250 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 ELF1P32519 619 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 DLG4P78352 724 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
CDC7-203ENST00000428239 KCNJ12Q14500 433 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 PSMD6Q15008 389 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 TAF12Q16514 161 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 TTI2Q6NXR4 508 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 LLGL2Q6P1M3 1020 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 DCLRE1AQ6PJP8 1040 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 CRELD2Q6UXH1 353 aaPredicted RBP7.56□□□□□ -1.2
CDC7-203ENST00000428239 LRRC55Q6ZSA7 311 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 EFCAB13Q8IY85 973 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 RSPH1Q8WYR4 309 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 IGSF21Q96ID5 467 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 SNX25Q9H3E2 840 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 TLR9Q9NR96 1032 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 SAMSN1Q9NSI8 373 aaKnown RBP7.56□□□□□ -1.2
CDC7-203ENST00000428239 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 STYXL1Q9Y6J8 313 aa7.56□□□□□ -1.2
CDC7-203ENST00000428239 CARNS1A5YM72 827 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 CYB561D2O14569 222 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 ABLIM1O14639 778 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PER2O15055 1255 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 RB1P06400 928 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 RPL9P32969 192 aaKnown RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 USP41Q3LFD5 358 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 KRT39Q6A163 491 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 LUZP1Q86V48 1076 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 TMEM173Q86WV6 379 aaPredicted RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 PALB2Q86YC2 1186 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PPM1KQ8N3J5 372 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 OR6B3Q8NGW1 331 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PARD3BQ8TEW8 1205 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 TMEM175Q9BSA9 504 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PI4K2AQ9BTU6 479 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 TANC1Q9C0D5 1861 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 LRRIQ3A6PVS8 624 aaPredicted RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 ITGB1P05556 798 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 ODC1P11926 461 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 KCNE1P15382 129 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 RPL17P18621 184 aaKnown RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 PNPLA4P41247 253 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 GLUD2P49448 558 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 MYL6P60660 151 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 YWHAHQ04917 246 aaPredicted RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 MYBPC2Q14324 1141 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 CTXN3Q4LDR2 81 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 FILIP1Q7Z7B0 1213 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 COLGALT2Q8IYK4 626 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 THEM5Q8N1Q8 247 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 ZNF689Q96CS4 500 aaPredicted RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 PPP1R10Q96QC0 940 aaKnown RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 MKNK1Q9BUB5 465 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 DNAI2Q9GZS0 605 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PPEF2O14830 753 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 SLC16A3O15427 465 aaKnown RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 AFPP02771 609 aaKnown RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 AP3M2P53677 418 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 ERVK-21P61565 698 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 C9orf57Q5W0N0 161 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PRSS55Q6UWB4 352 aaPredicted RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 NT5DC4Q86YG4 428 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 C12orf56Q8IXR9 622 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 SENP8Q96LD8 212 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 TUBGCP2Q9BSJ2 902 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 APOL5Q9BWW9 433 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 PDCL3Q9H2J4 239 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 CWH43Q9H720 699 aa7.55□□□□□ -1.2
CDC7-203ENST00000428239 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
CDC7-203ENST00000428239 LAMA3Q16787 3333 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 KPNA7A9QM74 516 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 B4GALT3O60512 393 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 N4BP1O75113 896 aaKnown RBP7.54□□□□□ -1.2
CDC7-203ENST00000428239 HLA-DRAP01903 254 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 TPM3P06753 285 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 PDGFRBP09619 1106 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 NDUFV1P49821 464 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 WNT7BP56706 349 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 KCNH2Q12809 1159 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 PSMD5Q16401 504 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 OVOS1Q6IE37 1185 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 ZNF280DQ6N043 979 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 C1orf127Q8N9H9 656 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 GSTCDQ8NEC7 633 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 FBXL13Q8NEE6 735 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
CDC7-203ENST00000428239 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
CDC7-203ENST00000428239 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms