RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 DCAF4L1Q3SXM0 396 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 C10orf76Q5T2E6 689 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 GDF6Q6KF10 455 aaPredicted RBP19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 TRAPPC11Q7Z392 1133 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 TMEM40Q8WWA1 233 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 FAM212AQ96EL1 285 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.3■□□□□ 0.681e-7■■■□□ 15.9
AC055811.2-201ENST00000427497 MTMR12Q9C0I1 747 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 HIPK3Q9H422 1215 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 LUC7LQ9NQ29 371 aaKnown RBP19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 NAGPAQ9UK23 515 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 ATP8B3O60423 1300 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 DDX3XO00571 662 aaKnown RBP eCLIP19.29■□□□□ 0.682e-20■■■□□ 16.2
AC055811.2-201ENST00000427497 AXLP30530 894 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 CYP2C18P33260 490 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 GRM5P41594 1212 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 NCBP1Q09161 790 aaKnown RBP19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 NAB2Q15742 525 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 ZNF569Q5MCW4 686 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 ZNF697Q5TEC3 545 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 C16orf59Q7L2K0 433 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 ELMO3Q96BJ8 720 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 ASB7Q9H672 318 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 APOBEC3GQ9HC16 384 aaKnown RBP19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 STXBP5LQ9Y2K9 1186 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 DUSP10Q9Y6W6 482 aa19.29■□□□□ 0.68
AC055811.2-201ENST00000427497 LACTBL1A8MY62 500 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 PHACTR2O75167 634 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 CASQ1P31415 396 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 SLC10A6Q3KNW5 377 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 SLC27A1Q6PCB7 646 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 APBB1IPQ7Z5R6 666 aaPredicted RBP19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 RPAINQ86UA6 219 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 SERINC5Q86VE9 423 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 LNX1Q8TBB1 728 aaPredicted RBP19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 CDH23Q9H251 3354 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 RALGAPA2Q2PPJ7 1873 aa19.28■□□□□ 0.68
AC055811.2-201ENST00000427497 ASS1P00966 412 aaKnown RBP19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 CST3P01034 146 aaPredicted RBP19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 TFAMQ00059 246 aaKnown RBP19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 TMEM240Q5SV17 173 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 SCARA3Q6AZY7 606 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 SPOPLQ6IQ16 392 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 ALKBH5Q6P6C2 394 aaKnown RBP19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 NOTUMQ6P988 496 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 SLC35F6Q8N357 371 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 ANKRD36BP1Q96IX9 119 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 FAM161BQ96MY7 647 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 GUCD1Q96NT3 240 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 CELF4Q9BZC1 486 aaKnown RBP19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 L2HGDHQ9H9P8 463 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 CITO14578 2027 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 UMODL1Q5DID0 1318 aa19.27■□□□□ 0.68
AC055811.2-201ENST00000427497 RIOK3O14730 519 aaKnown RBP19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 TNNC2P02585 160 aa19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 RPLP2P05387 115 aaKnown RBP19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 TMEM191BP0C7N4 346 aa19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 NOP14P78316 857 aaKnown RBP19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 MRPS6P82932 125 aaKnown RBP19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 EPS8L1Q8TE68 723 aa19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 ACAP3Q96P50 834 aa19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 AGPAT1Q99943 283 aa19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 TRMT13Q9NUP7 481 aaKnown RBP19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 NOCTQ9UK39 431 aaKnown RBP19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 NUB1Q9Y5A7 615 aa19.27■□□□□ 0.67
AC055811.2-201ENST00000427497 CYP26A1O43174 497 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 NPTXRO95502 500 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 NFICP08651 508 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 ACRP10323 421 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 TBXAS1P24557 533 aaPredicted RBP19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 CUL2Q13617 745 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 FAM47CQ5HY64 1035 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 JADE1Q6IE81 842 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 GLYCTKQ8IVS8 523 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 DHX38Q92620 1227 aaKnown RBP19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 ARID3AQ99856 593 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 IMPG2Q9BZV3 1241 aa19.26■□□□□ 0.67
AC055811.2-201ENST00000427497 BTNL10A8MVZ5 291 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 ACO1P21399 889 aaKnown RBP19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 USP8P40818 1118 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 MYL6P60660 151 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 SGSM1Q2NKQ1 1148 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 SMYD5Q6GMV2 418 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 PSRC1Q6PGN9 363 aaPredicted RBP19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 ZNF365Q70YC5 407 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 RSPH3Q86UC2 560 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 CD302Q8IX05 232 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 MYRIPQ8NFW9 859 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 SLC20A1Q8WUM9 679 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 SECISBP2LQ93073 1101 aaKnown RBP19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 WNT8BQ93098 351 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 CCDC94Q9BW85 323 aaPredicted RBP19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 PACSIN1Q9BY11 444 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 EIF2AQ9BY44 585 aaKnown RBP19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 IL23AQ9NPF7 189 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 SALL4Q9UJQ4 1053 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 INTUQ9ULD6 942 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 CNTN6Q9UQ52 1028 aa19.25■□□□□ 0.67
AC055811.2-201ENST00000427497 C2CD2Q9Y426 696 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms