RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 KCNC3Q14003 757 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 DUSP6Q16828 381 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 CTC1Q2NKJ3 1217 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 FAM171A1Q5VUB5 890 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 SCARA3Q6AZY7 606 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 PARD3BQ8TEW8 1205 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 CACTINQ8WUQ7 758 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 PPM1EQ8WY54 764 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 SUSD3Q96L08 255 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 CGRRF1Q99675 332 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 RXFP1Q9HBX9 757 aa23.26■■□□□ 1.31
RPUSD3-205ENST00000427174 TRIM49BA6NDI0 452 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 I3L4J1 428 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 M0QZQ0 153 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 TRAPPC3O43617 180 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 URODP06132 367 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 RPL13P26373 211 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 STIM1Q13586 685 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 LMBRD2Q68DH5 695 aaPredicted RBP23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 PIK3R5Q8WYR1 880 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 ZNF516Q92618 1163 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 POP1Q99575 1024 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 TTPALQ9BTX7 342 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 MTMR12Q9C0I1 747 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 MRPL17Q9NRX2 175 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 SIX4Q9UIU6 781 aa23.25■■□□□ 1.31
RPUSD3-205ENST00000427174 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 SPTLC1O15269 473 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 NRIP1P48552 1158 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 LILRA4P59901 499 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 BMS1Q14692 1282 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 C1orf220Q5T0J3 134 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 CEP135Q66GS9 1140 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 TTI2Q6NXR4 508 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 TMC2Q8TDI7 906 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 PPP2R3CQ969Q6 453 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 CCDC127Q96BQ5 260 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 BORCS6Q96GS4 357 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 CDCA3Q99618 268 aaPredicted RBP23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 DUSP9Q99956 384 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 MKNK1Q9BUB5 465 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 TLE6Q9H808 572 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 ITGA11Q9UKX5 1188 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 SSX2IPQ9Y2D8 614 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 FRMD4BQ9Y2L6 1034 aa23.24■■□□□ 1.31
RPUSD3-205ENST00000427174 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 LRRIQ3A6PVS8 624 aaPredicted RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 PER2O15055 1255 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 CNPP09543 421 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 DLATP10515 647 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 PAX3P23760 479 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 TKTP29401 623 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 ENPEPQ07075 957 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 ADAM15Q13444 863 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 DUOXA2Q1HG44 320 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 RBM23Q86U06 439 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 EFHBQ8N7U6 833 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 VN1R2Q8NFZ6 395 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 LNX1Q8TBB1 728 aaPredicted RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 PABPC5Q96DU9 382 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 ANKRD36BP1Q96IX9 119 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 KLHL5Q96PQ7 755 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 FNBP1Q96RU3 617 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 TSG101Q99816 390 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 FNIP2Q9P278 1114 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 NUB1Q9Y5A7 615 aa23.23■■□□□ 1.31
RPUSD3-205ENST00000427174 C2CD2LO14523 706 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 SYN3O14994 580 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 NCK2O43639 380 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 CLASP2O75122 1294 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 GLP2RO95838 553 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 ITGB3P05106 788 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 TMEM191BP0C7N4 346 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 PSMC2P35998 433 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 LTBRP36941 435 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 DLG4P78352 724 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 FKBP3Q00688 224 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 MRPL58Q14197 206 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 NELFBQ8WX92 580 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 RIN2Q8WYP3 895 aaPredicted RBP23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 MED15Q96RN5 788 aa23.22■■□□□ 1.31
RPUSD3-205ENST00000427174 CETN3O15182 167 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 TEX28O15482 410 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 LINC01565O15544 149 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 TNNI1P19237 187 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 POLR2BP30876 1174 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 KLHL10Q6JEL2 608 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 KIAA1841Q6NSI8 718 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 PRSS55Q6UWB4 352 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 TMEM184AQ6ZMB5 413 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 TRAPPC11Q7Z392 1133 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 FAM186BQ8IYM0 893 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 LRRC52Q8N7C0 313 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 MLKLQ8NB16 471 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 EEF2KMTQ96G04 330 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 PRDM6Q9NQX0 595 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 PCDHB8Q9UN66 801 aa23.21■■□□□ 1.31
RPUSD3-205ENST00000427174 AGAP1Q9UPQ3 857 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms