RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 TUBB2BQ9BVA1 445 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 TBC1D13Q9NVG8 400 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 DMAC2Q9NW81 257 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 HSPBP1Q9NZL4 362 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 CEP72Q9P209 647 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 DNAI1Q9UI46 699 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 CPSF3Q9UKF6 684 aaKnown RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 DAAM1Q9Y4D1 1078 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 MRPL42Q9Y6G3 142 aaKnown RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 TDRD15B5MCY1 1934 aaKnown RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 SZT2Q5T011 3432 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 GNG11P61952 73 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 MTF1Q14872 753 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 ENOX2Q16206 610 aaKnown RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 SPOUT1Q5T280 376 aaKnown RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 WDR59Q6PJI9 974 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 ZNF280BQ86YH2 543 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 C12orf56Q8IXR9 622 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 URGCPQ8TCY9 931 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 L2HGDHQ9H9P8 463 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 RPF1Q9H9Y2 349 aaKnown RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 SLC28A3Q9HAS3 691 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 PLCB1Q9NQ66 1216 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 FAM207AQ9NSI2 230 aaPredicted RBP16.86■□□□□ 0.29
SHOX2-202ENST00000425436 MTUS1Q9ULD2 1270 aa16.86■□□□□ 0.29
SHOX2-202ENST00000425436 LACTBL1A8MY62 500 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 EIF3CLB5ME19 914 aaKnown RBP16.85■□□□□ 0.29
SHOX2-202ENST00000425436 PTGESO14684 152 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 CTIFO43310 598 aaKnown RBP16.85■□□□□ 0.29
SHOX2-202ENST00000425436 EXTL3O43909 919 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 AKAP3O75969 853 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 DDHD2O94830 711 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 TAP1Q03518 808 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 RNASELQ05823 741 aaKnown RBP16.85■□□□□ 0.29
SHOX2-202ENST00000425436 PPP2R2DQ66LE6 453 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 GPD1LQ8N335 351 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 EIF3CQ99613 913 aaKnown RBP16.85■□□□□ 0.29
SHOX2-202ENST00000425436 DESI2Q9BSY9 194 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 CWH43Q9H720 699 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
SHOX2-202ENST00000425436 MYO6Q9UM54 1294 aa16.85■□□□□ 0.29
SHOX2-202ENST00000425436 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 B4GALT3O60512 393 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 KCNA4P22459 653 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 PBX3P40426 434 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 KLK7P49862 253 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 KCNMA1Q12791 1236 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 SPA17Q15506 151 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 CBWD2Q8IUF1 395 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 FMNL3Q8IVF7 1028 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 FAM186BQ8IYM0 893 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 LRRC43Q8N309 656 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 XXYLT1Q8NBI6 393 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 EHBP1Q8NDI1 1231 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 SNX27Q96L92 541 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 ZMAT2Q96NC0 199 aaKnown RBP16.84■□□□□ 0.29
SHOX2-202ENST00000425436 CHP1Q99653 195 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 C17orf80Q9BSJ5 609 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 NRDE2Q9H7Z3 1164 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 TOPORSQ9NS56 1045 aaPredicted RBP16.84■□□□□ 0.29
SHOX2-202ENST00000425436 KANSL3Q9P2N6 904 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 FBXL5Q9UKA1 691 aa16.84■□□□□ 0.29
SHOX2-202ENST00000425436 KIAA1671Q9BY89 1806 aa16.83■□□□□ 0.29
SHOX2-202ENST00000425436 CDH23Q9H251 3354 aa16.83■□□□□ 0.29
SHOX2-202ENST00000425436 SSU72P8A0A1W2PR75 194 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 MAPK13O15264 365 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 INPPL1O15357 1258 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 EXOC3O60645 756 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 LDHAP00338 332 aaKnown RBP16.83■□□□□ 0.28
SHOX2-202ENST00000425436 LINC00271P0C7V0 271 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 WNT7BP56706 349 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.28
SHOX2-202ENST00000425436 KYAT1Q16773 422 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 XKR4Q5GH76 650 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 PDXDC1Q6P996 788 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 GBP6Q6ZN66 633 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 RRAGAQ7L523 313 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 TMEM130Q8N3G9 435 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 RABGGTAQ92696 567 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 FAM193BQ96PV7 902 aaPredicted RBP16.83■□□□□ 0.28
SHOX2-202ENST00000425436 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
SHOX2-202ENST00000425436 TSGA10Q9BZW7 698 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 CACNG4Q9UBN1 327 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 ANK1P16157 1881 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 NLRC5Q86WI3 1866 aa16.83■□□□□ 0.28
SHOX2-202ENST00000425436 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
SHOX2-202ENST00000425436 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
SHOX2-202ENST00000425436 SLU7O95391 586 aaKnown RBP16.82■□□□□ 0.28
SHOX2-202ENST00000425436 THP07101 528 aa16.82■□□□□ 0.28
SHOX2-202ENST00000425436 CASP4P49662 377 aa16.82■□□□□ 0.28
SHOX2-202ENST00000425436 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
SHOX2-202ENST00000425436 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms