RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 UBE2TQ9NPD8 197 aaPredicted RBP23.17■■□□□ 1.3
ABCF3-202ENST00000421340 TUBGCP4Q9UGJ1 667 aa23.17■■□□□ 1.3
ABCF3-202ENST00000421340 AGAP1Q9UPQ3 857 aa23.17■■□□□ 1.3
ABCF3-202ENST00000421340 RALGAPA2Q2PPJ7 1873 aa23.17■■□□□ 1.3
ABCF3-202ENST00000421340 KRT19P08727 400 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 TBXAS1P24557 533 aaPredicted RBP23.16■■□□□ 1.3
ABCF3-202ENST00000421340 POLR2BP30876 1174 aaKnown RBP23.16■■□□□ 1.3
ABCF3-202ENST00000421340 HNRNPH3P31942 346 aaKnown RBP23.16■■□□□ 1.3
ABCF3-202ENST00000421340 PNPLA4P41247 253 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 SCNN1GP51170 649 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 NOP14P78316 857 aaKnown RBP23.16■■□□□ 1.3
ABCF3-202ENST00000421340 APBA1Q02410 837 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 BADQ92934 168 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 DDX27Q96GQ7 796 aaKnown RBP23.16■■□□□ 1.3
ABCF3-202ENST00000421340 UROC1Q96N76 676 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 PI4K2AQ9BTU6 479 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 PLAGL2Q9UPG8 496 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 FHOD1Q9Y613 1164 aa23.16■■□□□ 1.3
ABCF3-202ENST00000421340 ANK1P16157 1881 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 AMHP03971 560 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 AFF1P51825 1210 aaKnown RBP23.15■■□□□ 1.3
ABCF3-202ENST00000421340 ADKP55263 362 aaKnown RBP23.15■■□□□ 1.3
ABCF3-202ENST00000421340 JAM2P57087 298 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 SOX4Q06945 474 aaPredicted RBP23.15■■□□□ 1.3
ABCF3-202ENST00000421340 LRMPQ12912 555 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 TSR1Q2NL82 804 aaKnown RBP23.15■■□□□ 1.3
ABCF3-202ENST00000421340 ZNF699Q32M78 642 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 PDXDC1Q6P996 788 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 ARHGEF19Q8IW93 802 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 TATDN2Q93075 761 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 TOP1MTQ969P6 601 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 HPDLQ96IR7 371 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 APOBEC3GQ9HC16 384 aaKnown RBP23.15■■□□□ 1.3
ABCF3-202ENST00000421340 NLRC4Q9NPP4 1024 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 NUB1Q9Y5A7 615 aa23.15■■□□□ 1.3
ABCF3-202ENST00000421340 FGBP02675 491 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 P4HA1P13674 534 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 GUCY2FP51841 1108 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 TUSC3Q13454 348 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 HS1BP3Q53T59 392 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 SCARA3Q6AZY7 606 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.14■■□□□ 1.29
ABCF3-202ENST00000421340 C16orf59Q7L2K0 433 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 RRAGAQ7L523 313 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 LRRC8AQ8IWT6 810 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 ABI1Q8IZP0 508 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 PPM1KQ8N3J5 372 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 ZNF560Q96MR9 790 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 SPAG5Q96R06 1193 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 NIF3L1Q9GZT8 377 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 ABHD10Q9NUJ1 306 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 AIPL1Q9NZN9 384 aa23.14■■□□□ 1.29
ABCF3-202ENST00000421340 POMCP01189 267 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 FGFR1P11362 822 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 FECHP22830 423 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 CUL2Q13617 745 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 DRAP1Q14919 205 aaPredicted RBP23.13■■□□□ 1.29
ABCF3-202ENST00000421340 ZNF667Q5HYK9 610 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 GJB7Q6PEY0 223 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 PSRC1Q6PGN9 363 aaPredicted RBP23.13■■□□□ 1.29
ABCF3-202ENST00000421340 CASD1Q96PB1 797 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 MRPL9Q9BYD2 267 aaKnown RBP23.13■■□□□ 1.29
ABCF3-202ENST00000421340 CITO14578 2027 aa23.13■■□□□ 1.29
ABCF3-202ENST00000421340 LRRC53A6NM62 1247 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 FAM163BP0C2L3 166 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 ACRP10323 421 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 STAT1P42224 750 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 WDR5P61964 334 aaKnown RBP23.12■■□□□ 1.29
ABCF3-202ENST00000421340 CDK17Q00537 523 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 DSC1Q08554 894 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 SCN5AQ14524 2016 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 WDR72Q3MJ13 1102 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 SFMBT2Q5VUG0 894 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 TNS4Q8IZW8 715 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 CCDC112Q8NEF3 446 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 SHC3Q92529 594 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 DPF3Q92784 378 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 KREMEN1Q96MU8 473 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 CYP3A43Q9HB55 503 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 TBC1D13Q9NVG8 400 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 ZNHIT6Q9NWK9 470 aaKnown RBP23.12■■□□□ 1.29
ABCF3-202ENST00000421340 GDAP2Q9NXN4 497 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 INPP5FQ9Y2H2 1132 aa23.12■■□□□ 1.29
ABCF3-202ENST00000421340 F8VZ95 297 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 DGKIO75912 1065 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 CCDC172P0C7W6 258 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 IBSPP21815 317 aaPredicted RBP23.11■■□□□ 1.29
ABCF3-202ENST00000421340 SOX5P35711 763 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 TAF6P49848 677 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 YWHAEP62258 255 aaKnown RBP23.11■■□□□ 1.29
ABCF3-202ENST00000421340 RAPGEF1Q13905 1077 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 MEA1Q16626 185 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 UPP1Q16831 310 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 SV2CQ496J9 727 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 SPOPLQ6IQ16 392 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 TTC39CQ8N584 583 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 BCO2Q9BYV7 579 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 GPR88Q9GZN0 384 aa23.11■■□□□ 1.29
ABCF3-202ENST00000421340 AJAP1Q9UKB5 411 aaPredicted RBP23.11■■□□□ 1.29
ABCF3-202ENST00000421340 CNTN6Q9UQ52 1028 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms