RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 COQ4Q9Y3A0 265 aa13.83□□□□□ -0.2
ATG4B-208ENST00000419606 PODXLO00592 558 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 PIRO00625 290 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 SPTLC1O15269 473 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 TLL1O43897 1013 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 LINC00271P0C7V0 271 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 LRPAP1P30533 357 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 PBX2P40425 430 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 AP3M2P53677 418 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 BCAR1P56945 870 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 NCOA4Q13772 614 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 SYCP1Q15431 976 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 UPP1Q16831 310 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 GJB7Q6PEY0 223 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 SARM1Q6SZW1 724 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 TMEM173Q86WV6 379 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 CMTR2Q8IYT2 770 aaKnown RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 LRRC43Q8N309 656 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 EHBP1Q8NDI1 1231 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 FBXL13Q8NEE6 735 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 BCL7CQ8WUZ0 217 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 TATDN2Q93075 761 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 FAM193BQ96PV7 902 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 RAD9AQ99638 391 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 MRPL9Q9BYD2 267 aaKnown RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 INTS2Q9H0H0 1204 aaKnown RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 XYLT2Q9H1B5 865 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 PRO3102Q9H379 93 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 APOBEC3GQ9HC16 384 aaKnown RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 RAB20Q9NX57 234 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 GCNT4Q9P109 453 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 ITGA11Q9UKX5 1188 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 PRG3Q9Y2Y8 225 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-208ENST00000419606 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
ATG4B-208ENST00000419606 NRP1O14786 923 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 PMM2O15305 246 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 XPOTO43592 962 aaKnown RBP13.81□□□□□ -0.2
ATG4B-208ENST00000419606 KIF4AO95239 1232 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 GALTP07902 379 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 TPM2P07951 284 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 PON1P27169 355 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 PBX1P40424 430 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 BRCC3P46736 316 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 ZNF75DP51815 510 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 RBP5P82980 135 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 TRPC3Q13507 836 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 FILIP1LQ4L180 1135 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 FKBP15Q5T1M5 1219 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 SPOUT1Q5T280 376 aaKnown RBP13.81□□□□□ -0.2
ATG4B-208ENST00000419606 GBP6Q6ZN66 633 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 ARHGEF19Q8IW93 802 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-208ENST00000419606 LSM14BQ9BX40 385 aaKnown RBP13.81□□□□□ -0.2
ATG4B-208ENST00000419606 TRIM5Q9C035 493 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 SIX2Q9NPC8 291 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 AJAP1Q9UKB5 411 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-208ENST00000419606 POLIQ9UNA4 740 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 SIK3Q9Y2K2 1263 aa13.81□□□□□ -0.2
ATG4B-208ENST00000419606 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
ATG4B-208ENST00000419606 I3L4J1 428 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 EPHB6O15197 1021 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 P4HA2O15460 535 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 N4BP1O75113 896 aaKnown RBP13.8□□□□□ -0.2
ATG4B-208ENST00000419606 ASS1P00966 412 aaKnown RBP13.8□□□□□ -0.2
ATG4B-208ENST00000419606 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 PHLDB3Q6NSJ2 640 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 TDHQ8IZJ6 230 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 FIBCD1Q8N539 461 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 COLGALT1Q8NBJ5 622 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 KAT5Q92993 513 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 HPDLQ96IR7 371 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 ERGIC2Q96RQ1 377 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 NUB1Q9Y5A7 615 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
ATG4B-208ENST00000419606 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
ATG4B-208ENST00000419606 LINC01553A4QN01 128 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 B3GAT3O94766 335 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 NOL4O94818 638 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 ADCY5O95622 1261 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 CA3P07451 260 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
ATG4B-208ENST00000419606 LILRA4P59901 499 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 ZNF699Q32M78 642 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 KCNT2Q6UVM3 1135 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 LRRC52Q8N7C0 313 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
ATG4B-208ENST00000419606 UROC1Q96N76 676 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 SDCBP2Q9H190 292 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
ATG4B-208ENST00000419606 FAN1Q9Y2M0 1017 aa13.79□□□□□ -0.2
ATG4B-208ENST00000419606 CBFA2T2O43439 604 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 CLSTN1O94985 981 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 ALDH2P05091 517 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms