RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PBX3P40426 434 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 TFAMQ00059 246 aaKnown RBP12.87□□□□□ -0.35
ATG4B-207ENST00000415107 SPAG1Q07617 926 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 ZACNQ401N2 412 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 PDXDC1Q6P996 788 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-207ENST00000415107 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 TRIM59Q8IWR1 403 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 OR5B17Q8NGF7 314 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 SUSD3Q96L08 255 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 VN1R3Q9BXE9 311 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
ATG4B-207ENST00000415107 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 MTMR10Q9NXD2 777 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 SIX4Q9UIU6 781 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 ATG2AQ2TAZ0 1938 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 NT5C1B-RDH14C9J2C7 533 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 LILRB3O75022 631 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 DLATP10515 647 aaKnown RBP12.86□□□□□ -0.35
ATG4B-207ENST00000415107 TNNI1P19237 187 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 FGFR3P22607 806 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 ATICP31939 592 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 TAF6P49848 677 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 STX17P56962 302 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 LILRA4P59901 499 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 RBP5P82980 135 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 DSG1Q02413 1049 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
ATG4B-207ENST00000415107 USP41Q3LFD5 358 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 TIGD5Q53EQ6 642 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 DEFB123Q8N688 67 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 GDPD5Q8WTR4 605 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 CCDC127Q96BQ5 260 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 GUCD1Q96NT3 240 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
ATG4B-207ENST00000415107 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 COQ4Q9Y3A0 265 aa12.86□□□□□ -0.35
ATG4B-207ENST00000415107 TSC2P49815 1807 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 P4HA2O15460 535 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 TADA2AO75478 443 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 ITGB3P05106 788 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 CYP11A1P05108 521 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 TYMPP19971 482 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 DNAJB1P25685 340 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 DLG4P78352 724 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 MYL5Q02045 173 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 CREMQ03060 361 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 ADGRE1Q14246 886 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 SV2CQ496J9 727 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 KIAA0319Q5VV43 1072 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 TDRD10Q5VZ19 366 aaKnown RBP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 KRT39Q6A163 491 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 SV2AQ7L0J3 742 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 LIMS2Q7Z4I7 341 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 PIK3R5Q8WYR1 880 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 TAF4BQ92750 862 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 PRDM12Q9H4Q4 367 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 CERS4Q9HA82 394 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 RXFP1Q9HBX9 757 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 ALG13Q9NP73 1137 aaKnown RBP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATG4B-207ENST00000415107 CACNG4Q9UBN1 327 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 VWA8A3KMH1 1905 aa12.85□□□□□ -0.35
ATG4B-207ENST00000415107 SCN1AP35498 2009 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 SYCE3A1L190 88 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 F8W810 466 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 URODP06132 367 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 EEF1GP26641 437 aaKnown RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 GLUD2P49448 558 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 MXI1P50539 228 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 GUCY2FP51841 1108 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 PPP3CAQ08209 521 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 MYO1EQ12965 1108 aa12.84□□□□□ -0.35
ATG4B-207ENST00000415107 MRPL58Q14197 206 aaKnown RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
ATG4B-207ENST00000415107 NCAPHQ15003 741 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms