RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 LMBRD1Q9NUN5 540 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 TMEM189-UBE2V1I3L0A0 370 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 NR3C1P04150 777 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 CYP3A5P20815 502 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 LRPAP1P30533 357 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 KCNC3Q14003 757 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 PSMD5Q16401 504 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 CLSTN3Q9BQT9 956 aa12.96□□□□□ -0.33
NEDD1-202ENST00000411739 KRT19P08727 400 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 IL9P15248 144 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 FGFR3P22607 806 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 ARPP19P56211 112 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 CEP135Q66GS9 1140 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 C1orf127Q8N9H9 656 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 PLEKHO2Q8TD55 490 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 SLC22A17Q8WUG5 538 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 ATXN2LQ8WWM7 1075 aaKnown RBP12.96□□□□□ -0.34
NEDD1-202ENST00000411739 FBXL18Q96ME1 805 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 GSDMAQ96QA5 445 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 HOOK1Q9UJC3 728 aaKnown RBP12.96□□□□□ -0.34
NEDD1-202ENST00000411739 C2CD2Q9Y426 696 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 VWA8A3KMH1 1905 aa12.96□□□□□ -0.34
NEDD1-202ENST00000411739 PIRO00625 290 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 PDXKO00764 312 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 NCK2O43639 380 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 ITGB3P05106 788 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 BMP6P22004 513 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 POLR2BP30876 1174 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CLCN4P51793 760 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CYP24A1Q07973 514 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 PTCRAQ6ISU1 281 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 DSTYKQ6XUX3 929 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 GUF1Q8N442 669 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CSGALNACT2Q8N6G5 542 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 SPATA20Q8TB22 786 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 ELMO3Q96BJ8 720 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CDCA3Q99618 268 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 GZF1Q9H116 711 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 RXFP1Q9HBX9 757 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 AGAP1Q9UPQ3 857 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 DERAQ9Y315 318 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 GRXCR2A6NFK2 248 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 BMP1P13497 986 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 OR1D2P34982 312 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 LILRA4P59901 499 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 LEXMQ3ZCV2 418 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
NEDD1-202ENST00000411739 SYCE2Q6PIF2 218 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CLEC17AQ6ZS10 378 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 MSLNLQ96KJ4 702 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 SUSD3Q96L08 255 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 DMAC2Q9NW81 257 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CD207Q9UJ71 328 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 CDY1Q9Y6F8 540 aa12.95□□□□□ -0.34
NEDD1-202ENST00000411739 SCN1AP35498 2009 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 ANO9A1A5B4 782 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 TRIM49BA6NDI0 452 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 KIAA0391O15091 583 aaKnown RBP12.94□□□□□ -0.34
NEDD1-202ENST00000411739 TGM5O43548 720 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 CALUO43852 315 aaPredicted RBP12.94□□□□□ -0.34
NEDD1-202ENST00000411739 TMEM191BP0C7N4 346 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 TNNI1P19237 187 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 DLG4P78352 724 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 RARS2Q5T160 578 aaKnown RBP12.94□□□□□ -0.34
NEDD1-202ENST00000411739 KLHL10Q6JEL2 608 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 ANKRD54Q6NXT1 300 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 ZNF516Q92618 1163 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 STK39Q9UEW8 545 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 ADH1AP07327 375 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 NR2F2P24468 414 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
NEDD1-202ENST00000411739 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 C12orf56Q8IXR9 622 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 GOLGA5Q8TBA6 731 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 SENP8Q96LD8 212 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 MAN1C1Q9NR34 630 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 SIX4Q9UIU6 781 aa12.94□□□□□ -0.34
NEDD1-202ENST00000411739 RFPL2O75678 378 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 SP100P23497 879 aaPredicted RBP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 POU5F1Q01860 360 aaKnown RBP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 PSMD6Q15008 389 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 CXorf38Q8TB03 319 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 MFSD14AQ96MC6 490 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms