RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZSWIM4Q9H7M6 989 aa-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 ANAPC11Q9NYG5 84 aa-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 FAM30AQ9NZY2 134 aa-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 SLC6A5Q9Y345 797 aa-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 MMACHCQ9Y4U1 282 aa-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 RBM8AQ9Y5S9 174 aaKnown RBP-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 RNF215Q9Y6U7 377 aa-0.94□□□□□ -2.56
RNU4-88P-201ENST00000411220 NSD2O96028 1365 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 PTPN13Q12923 2485 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 LAMB2P55268 1798 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 BSNQ9UPA5 3926 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 IGKV1D-43A0A0B4J1Z2 117 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 KIR2DS3K7RE56 304 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TAF4O00268 1085 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 PODXLO00592 558 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 LATO43561 262 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 BUB3O43684 328 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 DNAJC6O75061 913 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TCEA3O75764 348 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 RAG1P15918 1043 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 AAMPQ13685 434 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 KIR2DS3Q14952 304 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 AASDHQ4L235 1098 aaPredicted RBP-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 NOL9Q5SY16 702 aaKnown RBP-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 FHL5Q5TD97 284 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TBC1D9BQ66K14 1250 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 CEP68Q76N32 757 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 KRT26Q7Z3Y9 468 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TMEM135Q86UB9 458 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 CDC20BQ86Y33 519 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 RFLNBQ8N5W9 214 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TAS1R2Q8TE23 839 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TFAP2BQ92481 460 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 RTP4Q96DX8 246 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 RBMXL1Q96E39 390 aaKnown RBP-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 DDRGK1Q96HY6 314 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 PCMTD1Q96MG8 357 aaPredicted RBP-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 RBM4Q9BWF3 364 aaKnown RBP-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 TRIM55Q9BYV6 548 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 BARHL1Q9BZE3 327 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 WDR13Q9H1Z4 485 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 SLC39A2Q9NP94 309 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 SH3BP4Q9P0V3 963 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 KCPQ6ZWJ8 1503 aa-0.95□□□□□ -2.56
RNU4-88P-201ENST00000411220 FASNP49327 2511 aaKnown RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 J3QKU1 62 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 STXBP3O00186 592 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 YY2O15391 372 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 H2AFYO75367 372 aaKnown RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 JTBO76095 146 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 F7P08709 466 aaPredicted RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 ZCCHC18P0CG32 403 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 CGB7P0DN87 165 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 CYP19A1P11511 503 aaPredicted RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 FASP25445 335 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 MLH1P40692 756 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 IARSP41252 1262 aaKnown RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 HSD17B4P51659 736 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 SESN2P58004 480 aaPredicted RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 UGP2Q16851 508 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 STPG1Q5TH74 334 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 DCAF15Q66K64 600 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 MBLAC2Q68D91 279 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 KRT40Q6A162 431 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 ZFAND6Q6FIF0 208 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 LCN10Q6JVE6 187 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 C7orf61Q8IZ16 206 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 JMYQ8N9B5 988 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 LMNTD1Q8N9Z9 388 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 RBM15BQ8NDT2 890 aaKnown RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 C3orf58Q8NDZ4 430 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 CLEC4DQ8WXI8 215 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 DHRS1Q96LJ7 313 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 DDX50Q9BQ39 737 aaKnown RBP-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 CDK19Q9BWU1 502 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 GALNT9Q9HCQ5 603 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 TCF7L1Q9HCS4 588 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 CHST11Q9NPF2 352 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 TMEM74BQ9NUR3 256 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 NCDNQ9UBB6 729 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 PPM1HQ9ULR3 514 aa-0.96□□□□□ -2.56
RNU4-88P-201ENST00000411220 ASH1LQ9NR48 2969 aaKnown RBP-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 SLC16A5O15375 505 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 LMX1BO60663 402 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 DNAJA2O60884 412 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 VSIG10L2P0DP72 767 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 MPSTP25325 297 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 EEF1A2Q05639 463 aaKnown RBP-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 HABP2Q14520 560 aaPredicted RBP-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 STILQ15468 1287 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 TSNAXIP1Q2TAA8 658 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 PRAMEF19Q5SWL8 479 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 CYP4F22Q6NT55 531 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 MORC1Q86VD1 984 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 MMP21Q8N119 569 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 TMEM132CQ8N3T6 1108 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 ACBD4Q8NC06 268 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 MPLKIPQ8TAP9 179 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 BRF1Q92994 677 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 SDHCQ99643 169 aaPredicted RBP-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms