RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 KRT4P19013 534 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 PDCP20941 246 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 CXADRP78310 365 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 UTP14CQ5TAP6 766 aaKnown RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 B3GNTL1Q67FW5 361 aaPredicted RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 ARMC6Q6NXE6 501 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 PNKPQ96T60 521 aa5.37□□□□□ -1.55
PMS1-203ENST00000409593 TESQ9UGI8 421 aaKnown RBP5.37□□□□□ -1.55
PMS1-203ENST00000409593 FOSP01100 380 aaPredicted RBP5.36□□□□□ -1.55
PMS1-203ENST00000409593 ITGAMP11215 1152 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 MALP21145 153 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 SMARCA1P28370 1054 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 ZEB1P37275 1124 aaPredicted RBP5.36□□□□□ -1.55
PMS1-203ENST00000409593 DSC2Q02487 901 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 SLFN5Q08AF3 891 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 SLC4A10Q6U841 1118 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.36□□□□□ -1.55
PMS1-203ENST00000409593 Q6ZPA2 131 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 USP45Q70EL2 814 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 RGMAQ96B86 450 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 DMRTA2Q96SC8 542 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 TLR10Q9BXR5 811 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 KCNE5Q9UJ90 142 aa5.36□□□□□ -1.55
PMS1-203ENST00000409593 FOXN1O15353 648 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 FTLP02792 175 aaPredicted RBP5.35□□□□□ -1.55
PMS1-203ENST00000409593 USP14P54578 494 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 PIN1Q13526 163 aaPredicted RBP5.35□□□□□ -1.55
PMS1-203ENST00000409593 FLYWCH1Q4VC44 716 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 Q6YL49 198 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 ZNF365Q70YC5 407 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 AOPEPQ8N6M6 819 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 C3orf20Q8ND61 904 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 BEND2Q8NDZ0 799 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 IL17RDQ8NFM7 739 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 ASB10Q8WXI3 467 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 GTPBP4Q9BZE4 634 aaKnown RBP5.35□□□□□ -1.55
PMS1-203ENST00000409593 SLAMF7Q9NQ25 335 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 JKAMPQ9P055 326 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 HSFX1Q9UBD0 423 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 DKK2Q9UBU2 259 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 PCDHA3Q9Y5H8 950 aa5.35□□□□□ -1.55
PMS1-203ENST00000409593 POU2F2P09086 479 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 VCAM1P19320 739 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 FXR1P51114 621 aaKnown RBP eCLIP5.34□□□□□ -1.55
PMS1-203ENST00000409593 MCL1Q07820 350 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 SNAPC2Q13487 334 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 PGS1Q32NB8 556 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 CCDC157Q569K6 752 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 THEMIS2Q5TEJ8 643 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 HECTD2Q5U5R9 776 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 CAVIN3Q969G5 261 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 GALNT9Q9HCQ5 603 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 POLHQ9Y253 713 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 ANKRD6Q9Y2G4 727 aa5.34□□□□□ -1.55
PMS1-203ENST00000409593 GRID2IPA4D2P6 1211 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 F2RL2O00254 374 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 SLC43A1O75387 559 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 GNAI3P08754 354 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 AVPR1BP47901 424 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 GNAI1P63096 354 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 FAM43AQ8N2R8 423 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 SLC17A8Q8NDX2 589 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 TMIEQ8NEW7 156 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 KLHL32Q96NJ5 620 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 ABCF2Q9UG63 623 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 FEZ2Q9UHY8 353 aaPredicted RBP5.34□□□□□ -1.56
PMS1-203ENST00000409593 ZNF180Q9UJW8 692 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 DMRT1Q9Y5R6 373 aa5.34□□□□□ -1.56
PMS1-203ENST00000409593 ABLIM3O94929 683 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 GCP02774 474 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 NOGQ13253 232 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 CYP2A13Q16696 494 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 GEN1Q17RS7 908 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 ODR4Q5SWX8 454 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 ABHD17BQ5VST6 288 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 GPR149Q86SP6 731 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 SLC44A3Q8N4M1 653 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 SH2D3CQ8N5H7 860 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 BOD1Q96IK1 185 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 MED15Q96RN5 788 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 NUP88Q99567 741 aaPredicted RBP5.33□□□□□ -1.56
PMS1-203ENST00000409593 TCF7L1Q9HCS4 588 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 KMT5AQ9NQR1 393 aa5.33□□□□□ -1.56
PMS1-203ENST00000409593 GNL3LQ9NVN8 582 aaKnown RBP5.33□□□□□ -1.56
PMS1-203ENST00000409593 E2F8A0AVK6 867 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 PIPSLA2A3N6 862 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 ZNF785A8K8V0 405 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 SLC16A6O15403 523 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 ZFPL1O95159 310 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 HKR1P10072 659 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 AKAP5P24588 427 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 RAB27AP51159 221 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 PSMC1P62191 440 aaKnown RBP5.32□□□□□ -1.56
PMS1-203ENST00000409593 ZNF844Q08AG5 666 aa5.32□□□□□ -1.56
PMS1-203ENST00000409593 PREPLQ4J6C6 727 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms