RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 UBQLN1Q9UMX0 589 aaKnown RBP11.06□□□□□ -0.64
SNORD88C-201ENST00000408061 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
SNORD88C-201ENST00000408061 PIN4Q9Y237 131 aaKnown RBP11.06□□□□□ -0.64
SNORD88C-201ENST00000408061 NOD1Q9Y239 953 aa11.06□□□□□ -0.64
SNORD88C-201ENST00000408061 GINS2Q9Y248 185 aa11.06□□□□□ -0.64
SNORD88C-201ENST00000408061 NUB1Q9Y5A7 615 aa11.06□□□□□ -0.64
SNORD88C-201ENST00000408061 MYH10P35580 1976 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 RCCD1A6NED2 376 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 CSDE1O75534 798 aaKnown RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 URI1O94763 535 aaPredicted RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 SLU7O95391 586 aaKnown RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 SGPL1O95470 568 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 PAEPP09466 180 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 MYBL1P10243 752 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 KRT5P13647 590 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 MYL6P60660 151 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 OSTNP61366 133 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 GPC5P78333 572 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 SLC35F6Q8N357 371 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 UBR7Q8N806 425 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 C1orf127Q8N9H9 656 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 RPGRIP1Q96KN7 1286 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 WDR24Q96S15 920 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 PI4K2AQ9BTU6 479 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 BCO2Q9BYV7 579 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 APOBEC3GQ9HC16 384 aaKnown RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 SLC38A7Q9NVC3 462 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 CDC23Q9UJX2 597 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 NOC2LQ9Y3T9 749 aaKnown RBP11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 PCDHB4Q9Y5E5 795 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 GRIN2DO15399 1336 aa11.05□□□□□ -0.64
SNORD88C-201ENST00000408061 ARVCFO00192 962 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 DNM1LO00429 736 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 MED7O43513 233 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 MTA2O94776 668 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 PARNO95453 639 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 CHRNA1P02708 482 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 TCP1P17987 556 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 ZNF132P52740 706 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 GALCP54803 685 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 STILQ15468 1287 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 WHAMMP3Q1A5X7 153 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 UBXN11Q5T124 520 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 TWF2Q6IBS0 349 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 ACAD10Q6JQN1 1059 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 DPH6Q7L8W6 267 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 MRPL10Q7Z7H8 261 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 NOP9Q86U38 636 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 CDR2LQ86X02 465 aaPredicted RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 RPUSD2Q8IZ73 545 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 MNS1Q8NEH6 495 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 RFFLQ8WZ73 363 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 KAT5Q92993 513 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 PGBD4Q96DM1 585 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 PPP1R16BQ96T49 567 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 SNTG2Q9NY99 539 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 UVRAGQ9P2Y5 699 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 ST3GAL5Q9UNP4 418 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 SAR1BQ9Y6B6 198 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 NCANO14594 1321 aa11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 PDCD11Q14690 1871 aaKnown RBP11.04□□□□□ -0.64
SNORD88C-201ENST00000408061 FRMPD3Q5JV73 1810 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 MACROD2A1Z1Q3 448 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 CES2O00748 559 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 CYP1A1P04798 512 aaPredicted RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 ITGB3P05106 788 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 NFICP08651 508 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 KRT19P08727 400 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 CHRNB2P17787 502 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 FGFR4P22455 802 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 THPOP40225 353 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 NAP1L1P55209 391 aaKnown RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 FMO1Q01740 532 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 CLUL1Q15846 466 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 WDR72Q3MJ13 1102 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms