RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FAM83AQ86UY5 434 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 VPS37AQ8NEZ2 397 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 HDAC10Q969S8 669 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 PLEKHG4BQ96PX9 1271 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 CPPED1Q9BRF8 314 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 RBM12Q9NTZ6 932 aaKnown RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 STXBP5LQ9Y2K9 1186 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 CHST2Q9Y4C5 530 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 A0A088AWK7 358 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 GOLGA6L6A8MZA4 724 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 RASA4BC9J798 803 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 RASA4O43374 803 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 AKR1B10O60218 316 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 FZD7O75084 574 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 FLT3LGP49771 235 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 STK3Q13188 491 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 TUBA3CQ13748 450 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 RALBP1Q15311 655 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 BMT2Q1RMZ1 405 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 LSM12Q3MHD2 195 aaKnown RBP6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 TUBA3EQ6PEY2 450 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 MAEAQ7L5Y9 396 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 GSPT2Q8IYD1 628 aaKnown RBP6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 MYRIPQ8NFW9 859 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 DEPTORQ8TB45 409 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 SLC35B2Q8TB61 432 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 PNISRQ8TF01 805 aaKnown RBP6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 LRTOMTQ8WZ04 291 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 CCDC138Q96M89 665 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 TBCBQ99426 244 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 CDC5LQ99459 802 aaKnown RBP6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 HERPUD2Q9BSE4 406 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 NUP62CLQ9H1M0 184 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 PCED1AQ9H1Q7 454 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 GNL3LQ9NVN8 582 aaKnown RBP6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 PARPBPQ9NWS1 579 aa6.07□□□□□ -1.44
HMGB1P13-201ENST00000406019 AHRRA9YTQ3 701 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 B5MCH6 92 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 TRIM24O15164 1050 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 SLC16A6O15403 523 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 FRS3O43559 492 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 ZNF202O95125 648 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 ADSLP30566 484 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 MAP2K6P52564 334 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 KLF10Q13118 480 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 IFIT5Q13325 482 aaKnown RBP6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 IL10RAQ13651 578 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 FAM47AQ5JRC9 791 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 DAAM2Q86T65 1068 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 COL23A1Q86Y22 540 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 KLHDC4Q8TBB5 520 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 NSUN6Q8TEA1 469 aaKnown RBP6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 DPF2Q92785 391 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 NEU1Q99519 415 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 NDC1Q9BTX1 674 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 SELENOOQ9BVL4 669 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 APOL5Q9BWW9 433 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 BTBD1Q9H0C5 482 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 KMT5AQ9NQR1 393 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 TRMT13Q9NUP7 481 aaKnown RBP6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 PCDHB1Q9Y5F3 818 aa6.06□□□□□ -1.44
HMGB1P13-201ENST00000406019 PNPLA7Q6ZV29 1317 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 TBKBP1A7MCY6 615 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 CXorf49A8MYA2 514 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 LEFTY2O00292 366 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 TBX3O15119 743 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 SH3BP5O60239 455 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 PIP5K1CO60331 668 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 FSHBP01225 129 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 GSPT1P15170 499 aaKnown RBP6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 PIK3CBP42338 1070 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 HALP42357 657 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 PRIM2P49643 509 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 GPSM2P81274 684 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 POLD3Q15054 466 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 APOA5Q6Q788 366 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 DPP9Q86TI2 863 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 SKAP1Q86WV1 359 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 ACRBPQ8NEB7 543 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 PLBD2Q8NHP8 589 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 KAT5Q92993 513 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 PHKBQ93100 1093 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 CDK5RAP3Q96JB5 506 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 ADI1Q9BV57 179 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 ZNF341Q9BYN7 854 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 C22orf23Q9BZE7 217 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 ZNF768Q9H5H4 540 aaKnown RBP6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 ATP6V0A4Q9HBG4 840 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 ING1Q9UK53 422 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 NR2E3Q9Y5X4 410 aa6.05□□□□□ -1.44
HMGB1P13-201ENST00000406019 CYR61O00622 381 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 PJA2O43164 708 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 SGTAO43765 313 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 FAM20BO75063 409 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 MYF5P13349 255 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 ECHS1P30084 290 aa6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 APOBEC3AP31941 199 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P13-201ENST00000406019 CASP5P51878 434 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms