RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MTA2O94776 668 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 RNF43Q68DV7 783 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 TRMT10CQ7L0Y3 403 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 FAM71AQ8IYT1 594 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 RBBP8NLQ8NC74 664 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 SUPT20HQ8NEM7 779 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 SH3TC2Q8TF17 1288 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 WDR11Q9BZH6 1224 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 ZWILCHQ9H900 591 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 ZBTB21Q9ULJ3 1066 aa16.98■□□□□ 0.31
CHMP1A-201ENST00000397901 IPO5O00410 1097 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 TP73O15350 636 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 CALCAP01258 141 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 VPS41P49754 854 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 VSTM1Q6UX27 236 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 XXYLT1Q8NBI6 393 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 MORC4Q8TE76 937 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 PWWP2AQ96N64 755 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 CAMKK2Q96RR4 588 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 NUDCD1Q96RS6 583 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 ROPN1BQ9BZX4 212 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 ROPN1Q9HAT0 212 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 CHST7Q9NS84 486 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 GH1P01241 217 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 CYP1A2P05177 515 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 GZMAP12544 262 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 PTDSS1P48651 473 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 ADCY1Q08828 1119 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 MUM1Q2TAK8 710 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 PHLDB2Q86SQ0 1253 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 SEMA4DQ92854 862 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 CCDC127Q96BQ5 260 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 UBE2OQ9C0C9 1292 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 LRMDAQ9H2I8 198 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 KLHL14Q9P2G3 628 aa16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 LARSQ9P2J5 1176 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 RBBP6Q7Z6E9 1792 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-201ENST00000397901 ADRB2P07550 413 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 KYNUQ16719 465 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 WASHC2DQ5SRD0 308 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 LONP2Q86WA8 852 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 FAM192AQ9GZU8 254 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 LRRC19Q9H756 370 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 PHF24Q9UPV7 400 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 TMEM150BA6NC51 233 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 P4HA2O15460 535 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 FAM163BP0C2L3 166 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 CYP11B1P15538 503 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 MYBPC2Q14324 1141 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 TNIP1Q15025 636 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 SEPT14Q6ZU15 432 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 C12orf50Q8NA57 414 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 CFAP61Q8NHU2 1237 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 PSPC1Q8WXF1 523 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 DHX38Q92620 1227 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 RMDN2Q96LZ7 410 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 TMEM237Q96Q45 408 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 SUDS3Q9H7L9 328 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 TBK1Q9UHD2 729 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 GTF3C4Q9UKN8 822 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 LRCH1Q9Y2L9 728 aa16.96■□□□□ 0.31
CHMP1A-201ENST00000397901 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 MPP2Q14168 576 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 ZYXQ15942 572 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 ZNF568Q3ZCX4 644 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 MIER3Q7Z3K6 550 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 STK32BQ9NY57 414 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 WHRNQ9P202 907 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 LMNAP02545 664 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 MUTP22033 750 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 ITGA8P53708 1063 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 ACVR2BQ13705 512 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 FOXB2Q5VYV0 432 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 CBWD2Q8IUF1 395 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 FAM13CQ8NE31 585 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 MIPOL1Q8TD10 442 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 SERPINB12Q96P63 405 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 CSRNP1Q96S65 589 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 HERPUD2Q9BSE4 406 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 GPRC5CQ9NQ84 441 aa16.95■□□□□ 0.3
CHMP1A-201ENST00000397901 SLC16A4O15374 487 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 NVLO15381 856 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 THAP12O43422 761 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 BRAFP15056 766 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 MTA1Q13330 715 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 C1QTNF12Q5T7M4 302 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 HAUS6Q7Z4H7 955 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 CYP4X1Q8N118 509 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 SHC3Q92529 594 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 INPP5DQ92835 1189 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 SNF8Q96H20 258 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms