RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ZBED4O75132 1171 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 T-ENOLP0DO92 83 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 TARSP26639 723 aaKnown RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 GCAP28676 217 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 DNAJC3Q13217 504 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 ZC3H12AQ5D1E8 599 aaKnown RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 LONP2Q86WA8 852 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 RHOT1Q8IXI2 618 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 FBXL13Q8NEE6 735 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 KCNV2Q8TDN2 545 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 C9orf72Q96LT7 481 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 KIF9Q9HAQ2 790 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 HAO1Q9UJM8 370 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 SERPINB2P05120 415 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 P4HBP07237 508 aaKnown RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 NCKAP1LP55160 1127 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 TNIP1Q15025 636 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 PPP1R2P3Q6NXS1 205 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 PTF1AQ7RTS3 328 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 HAUS6Q7Z4H7 955 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 EXD1Q8NHP7 514 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 PHACTR1Q9C0D0 580 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 ZC3H12CQ9C0D7 883 aaKnown RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 KIAA1586Q9HCI6 787 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 DDTLA6NHG4 134 aaPredicted RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 IPO5O00410 1097 aaKnown RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 DNALI1O14645 258 aaPredicted RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 PPEF1O14829 653 aaPredicted RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 RALAP11233 206 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 ATP4AP20648 1035 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 CETN2P41208 172 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 SHROOM1Q2M3G4 852 aaPredicted RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 FYB2Q5VWT5 728 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 SEPT14Q6ZU15 432 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 PARD3BQ8TEW8 1205 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 OSBPL8Q9BZF1 889 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 ACP6Q9NPH0 428 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 STOML1Q9UBI4 398 aa9.22□□□□□ -0.93
BDNF-204ENST00000395980 MRPL11Q9Y3B7 192 aaKnown RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 COL2A1P02458 1487 aaPredicted RBP9.22□□□□□ -0.93
BDNF-204ENST00000395980 LRRD1A4D1F6 860 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 TISP43B9A030 160 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 TOM1O60784 492 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 ZWINTO95229 277 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 CFBP00751 764 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 NEFHP12036 1026 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 GM2AP17900 193 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 MARK3P27448 753 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 PCK1P35558 622 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 STAT2P52630 851 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 BPIFB4P59827 614 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 SNRNP35Q16560 246 aaKnown RBP9.21□□□□□ -0.93
BDNF-204ENST00000395980 AOC3Q16853 763 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 FAM98CQ17RN3 349 aaKnown RBP9.21□□□□□ -0.93
BDNF-204ENST00000395980 NIPA1Q7RTP0 329 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 CCDC125Q86Z20 511 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 OGFOD1Q8N543 542 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.21□□□□□ -0.93
BDNF-204ENST00000395980 FAM167BQ9BTA0 163 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 DEFB129Q9H1M3 183 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 RAB20Q9NX57 234 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 UMODL1Q5DID0 1318 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 TYROBPO43914 113 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 ARP10275 920 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 RARRES1P49788 294 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.93
BDNF-204ENST00000395980 KLC1Q07866 573 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 IRGCQ6NXR0 463 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 SLC30A10Q6XR72 485 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 TRIM72Q6ZMU5 477 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 MIER3Q7Z3K6 550 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 RBBP8NLQ8NC74 664 aaPredicted RBP9.21□□□□□ -0.93
BDNF-204ENST00000395980 DNAJC9Q8WXX5 260 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 FBXL18Q96ME1 805 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 PWWP2AQ96N64 755 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 PAIP2Q9BPZ3 127 aaKnown RBP9.21□□□□□ -0.93
BDNF-204ENST00000395980 SAYSD1Q9NPB0 183 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 BCS1LQ9Y276 419 aa9.21□□□□□ -0.93
BDNF-204ENST00000395980 FAM196BA6NMK8 535 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 SLURP2P0DP57 97 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 FDX1P10109 184 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 TAL1P17542 331 aaPredicted RBP9.21□□□□□ -0.94
BDNF-204ENST00000395980 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.94
BDNF-204ENST00000395980 VPS41P49754 854 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 SARNPP82979 210 aaKnown RBP9.21□□□□□ -0.94
BDNF-204ENST00000395980 MORF4L2Q15014 288 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 LIN9Q5TKA1 542 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 HHATQ5VTY9 493 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 CYP4F22Q6NT55 531 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 SH3BP5LQ7L8J4 393 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 MYPNQ86TC9 1320 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 VCPIP1Q96JH7 1222 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 MFSD14AQ96MC6 490 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 MXRA8Q9BRK3 442 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 PSMC3IPQ9P2W1 217 aaPredicted RBP9.21□□□□□ -0.94
BDNF-204ENST00000395980 ZFP69BQ9UJL9 534 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 NRXN2Q9P2S2 1712 aa9.21□□□□□ -0.94
BDNF-204ENST00000395980 SPAG7O75391 227 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms