RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
SIN3A-202ENST00000394947 HDHD2Q9H0R4 259 aa12.84□□□□□ -0.35
SIN3A-202ENST00000394947 TBC1D23Q9NUY8 699 aa12.84□□□□□ -0.35
SIN3A-202ENST00000394947 PYGMP11217 842 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 MAPK9P45984 424 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 USP39Q53GS9 565 aaKnown RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 CIAPIN1Q6FI81 312 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 CCDC22O60826 627 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 CYP4A22Q5TCH4 519 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 PRPF3O43395 683 aaKnown RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 RAD51Q06609 339 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 RALGDSQ12967 914 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 LRRC1Q9BTT6 524 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 TAF1DQ9H5J8 278 aaPredicted RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ZC3H7BQ9UGR2 993 aaKnown RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 PIPSLA2A3N6 862 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ATP8B1O43520 1251 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 PCNAP12004 261 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ATP6V1C1P21283 382 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 EML3Q32P44 896 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 TBC1D19Q8N5T2 526 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 NACC2Q96BF6 587 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 LXNQ9BS40 222 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ERVV-2B6SEH9 535 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 STRNO43815 780 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 CRKP46108 304 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 OR6J1Q8NGC5 347 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 C9orf72Q96LT7 481 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 RSPH9Q9H1X1 276 aaPredicted RBP12.83□□□□□ -0.36
SIN3A-202ENST00000394947 PARVAQ9NVD7 372 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 SESN1Q9Y6P5 492 aa12.83□□□□□ -0.36
SIN3A-202ENST00000394947 ALDH1A1P00352 501 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 NFICP08651 508 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 WEE1P30291 646 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 PSMC6P62333 389 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 OVGP1Q12889 678 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 MAPRE2Q15555 327 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 ZSWIM7Q19AV6 140 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 P3H2Q8IVL5 708 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 DHX40Q8IX18 779 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 ATP6V1G3Q96LB4 118 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 RNF14Q9UBS8 474 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 F8W810 466 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 JAK3P52333 1124 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 STX3Q13277 289 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 TERF2Q15554 542 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 RESP18Q5W5W9 173 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 PPP1R2P3Q6NXS1 205 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 REXO4Q9GZR2 422 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 FAM25AB3EWG3 89 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 FAM25CB3EWG5 89 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 FAM25GB3EWG6 89 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 TFE3P19532 575 aaPredicted RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 TARSP26639 723 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 NMT1P30419 496 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 GPSM2P81274 684 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 RESTQ13127 1097 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 MROH9Q5TGP6 573 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 RNASE11Q8TAA1 199 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 NARS2Q96I59 477 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 MRPL4Q9BYD3 311 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 SCN3BQ9NY72 215 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 CDK17Q00537 523 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 DGKKQ5KSL6 1271 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 THUMPD3Q9BV44 507 aaKnown RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 GPR63Q9BZJ6 419 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 E9PBE3 544 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 ABCB1P08183 1280 aaPredicted RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 UNC13DQ70J99 1090 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 ZNF512Q96ME7 567 aaPredicted RBP12.82□□□□□ -0.36
SIN3A-202ENST00000394947 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 SNX8Q9Y5X2 465 aa12.82□□□□□ -0.36
SIN3A-202ENST00000394947 EXD1Q8NHP7 514 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 KLF15Q9UIH9 416 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 SNX9Q9Y5X1 595 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 RALBP11234 206 aa12.81□□□□□ -0.36
SIN3A-202ENST00000394947 CHI3L2Q15782 390 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms