RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CTAGE4Q8IX94 777 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CAGE1Q8TC20 777 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CYFIP2Q96F07 1278 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 ZSWIM1Q9BR11 485 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 PARD6BQ9BYG5 372 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 TRIM7Q9C029 511 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 SNTG2Q9NY99 539 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 FEZ2Q9UHY8 353 aaPredicted RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 MGAMO43451 1857 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 TRIP12Q14669 1992 aaPredicted RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 A0A1B0GUA9 196 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 MBLAC1A4D2B0 266 aaPredicted RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 ITGB3P05106 788 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CCDC172P0C7W6 258 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 AKAP5P24588 427 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CDR1P51861 262 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CDR2Q01850 454 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 FAM187BQ17R55 369 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 CATSPER4Q7RTX7 472 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 CTNNBL1Q8WYA6 563 aaPredicted RBP16.04■□□□□ 0.16
MKS1-202ENST00000393119 GOLGA1Q92805 767 aa16.04■□□□□ 0.16
MKS1-202ENST00000393119 GJB6O95452 261 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 SCP2P22307 547 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 DEFB115Q30KQ5 88 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 DAB2IPQ5VWQ8 1189 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 ZMAT2Q96NC0 199 aaKnown RBP16.03■□□□□ 0.16
MKS1-202ENST00000393119 ISCUQ9H1K1 167 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
MKS1-202ENST00000393119 NXF3Q9H4D5 531 aaKnown RBP16.03■□□□□ 0.16
MKS1-202ENST00000393119 RRN3P2A6NIE6 340 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 PPEF2O14830 753 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 TRPC3Q13507 836 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 NBPF20Q3BBV1 942 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 C7orf31Q8N865 590 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 RBBP8NLQ8NC74 664 aaPredicted RBP16.02■□□□□ 0.16
MKS1-202ENST00000393119 SDCBP2Q9H190 292 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 KLK14Q9P0G3 267 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 HMGXB4Q9UGU5 601 aa16.02■□□□□ 0.16
MKS1-202ENST00000393119 ANKRD62A6NC57 917 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 B4GALT4O60513 344 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 CTSHP09668 335 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 POU5F1BQ06416 359 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 FAM47CQ5HY64 1035 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 NAA35Q5VZE5 725 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 AADACL2Q6P093 401 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 CXorf38Q8TB03 319 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 CD99L2Q8TCZ2 262 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 HDAC7Q8WUI4 952 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 CTTNBP2NLQ9P2B4 639 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 KAT6AQ92794 2004 aa16.02■□□□□ 0.15
MKS1-202ENST00000393119 C17orf102A2RUQ5 167 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 KCNK3O14649 394 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.15
MKS1-202ENST00000393119 TOMM70O94826 608 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 MCF2P10911 925 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 BRD2P25440 801 aaKnown RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 ASPAP45381 313 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 ZNF699Q32M78 642 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 WDR72Q3MJ13 1102 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 GDF6Q6KF10 455 aaPredicted RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 CISHQ9NSE2 258 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 SMIM35A0A1B0GVV1 85 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 BTNL10A8MVZ5 291 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 RTN2O75298 545 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 DARSP14868 501 aaKnown RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 IGFBP6P24592 240 aaPredicted RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 GNA15P30679 374 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 SNX17Q15036 470 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 LLGL1Q15334 1064 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 RFFLQ8WZ73 363 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 C18orf25Q96B23 403 aaPredicted RBP16.01■□□□□ 0.15
MKS1-202ENST00000393119 SMYD3Q9H7B4 428 aa16.01■□□□□ 0.15
MKS1-202ENST00000393119 ANXA13P27216 316 aa16■□□□□ 0.15
MKS1-202ENST00000393119 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
MKS1-202ENST00000393119 MARCKSL1P49006 195 aa16■□□□□ 0.15
MKS1-202ENST00000393119 SP3Q02447 781 aa16■□□□□ 0.15
MKS1-202ENST00000393119 ENPEPQ07075 957 aa16■□□□□ 0.15
MKS1-202ENST00000393119 NOGQ13253 232 aa16■□□□□ 0.15
MKS1-202ENST00000393119 NT5DC3Q86UY8 548 aa16■□□□□ 0.15
MKS1-202ENST00000393119 ZNF410Q86VK4 478 aa16■□□□□ 0.15
MKS1-202ENST00000393119 ANKRD36BP1Q96IX9 119 aa16■□□□□ 0.15
MKS1-202ENST00000393119 ACAP3Q96P50 834 aa16■□□□□ 0.15
MKS1-202ENST00000393119 TWNKQ96RR1 684 aa16■□□□□ 0.15
MKS1-202ENST00000393119 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
MKS1-202ENST00000393119 PIN4Q9Y237 131 aaKnown RBP16■□□□□ 0.15
MKS1-202ENST00000393119 MEIS3P2A8K0S8 358 aa16■□□□□ 0.15
MKS1-202ENST00000393119 THAP12O43422 761 aa16■□□□□ 0.15
MKS1-202ENST00000393119 SASH3O75995 380 aa16■□□□□ 0.15
MKS1-202ENST00000393119 KIF4AO95239 1232 aa16■□□□□ 0.15
MKS1-202ENST00000393119 TNNC2P02585 160 aa16■□□□□ 0.15
MKS1-202ENST00000393119 EIF4BP23588 611 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms