RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ANO9A1A5B4 782 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 PIRO00625 290 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 FSCN2O14926 492 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 SYN3O14994 580 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 SLC16A3O15427 465 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 AKAP3O75969 853 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 CXCL14O95715 111 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 GNA14O95837 355 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 C1RP00736 705 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TNNC2P02585 160 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TMEM191BP0C7N4 346 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 EPB41P11171 864 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 KRT13P13646 458 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TNNI1P19237 187 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 ERCC5P28715 1186 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 ERVFC1P60507 584 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 RBP5P82980 135 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TFAMQ00059 246 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 CREMQ03060 361 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 SPAG1Q07617 926 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 CAMK1Q14012 370 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 SMC1AQ14683 1233 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 C9orf57Q5W0N0 161 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 CEP135Q66GS9 1140 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 KIAA1841Q6NSI8 718 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 FUT10Q6P4F1 479 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 SASS6Q6UVJ0 657 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TMEM173Q86WV6 379 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 FAM186BQ8IYM0 893 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 RNF168Q8IYW5 571 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 LRRC52Q8N7C0 313 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 MRPL43Q8N983 215 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 ZSWIM2Q8NEG5 633 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 NELFBQ8WX92 580 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 C18orf25Q96B23 403 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 CDCA3Q99618 268 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TCF25Q9BQ70 676 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 PAAF1Q9BRP4 392 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 HERC2P3Q9BVR0 1158 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 MFRPQ9BY79 579 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 OXCT2Q9BYC2 517 aaPredicted RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 ZBP1Q9H171 429 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 NSUN3Q9H649 340 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 GOLGA2P5Q9HBQ8 144 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 METTL14Q9HCE5 456 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 MRPL17Q9NRX2 175 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TUBGCP4Q9UGJ1 667 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 RWDD2AQ9UIY3 292 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 ITGA11Q9UKX5 1188 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 NUB1Q9Y5A7 615 aa7.31□□□□□ -1.24
UBBP1-201ENST00000392399 TDRD15B5MCY1 1934 aaKnown RBP7.31□□□□□ -1.24
UBBP1-201ENST00000392399 STX10O60499 249 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 LILRB3O75022 631 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 KIF4AO95239 1232 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 URODP06132 367 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 NFICP08651 508 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 FAM163BP0C2L3 166 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 DLATP10515 647 aaKnown RBP7.3□□□□□ -1.24
UBBP1-201ENST00000392399 HOXB1P14653 301 aaPredicted RBP7.3□□□□□ -1.24
UBBP1-201ENST00000392399 FGFR3P22607 806 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 DNAJB1P25685 340 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 GTF2H1P32780 548 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 GLUD2P49448 558 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 AARSP49588 968 aaKnown RBP eCLIP7.3□□□□□ -1.24
UBBP1-201ENST00000392399 CASP4P49662 377 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 TAF6P49848 677 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 VAMP7P51809 220 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 PMS1P54277 932 aaKnown RBP7.3□□□□□ -1.24
UBBP1-201ENST00000392399 LILRA4P59901 499 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 DSG1Q02413 1049 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 BFSP1Q12934 665 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 FAM171A1Q5VUB5 890 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 KIAA0319Q5VV43 1072 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 KLHL10Q6JEL2 608 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 TTI2Q6NXR4 508 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 CD300LGQ6UXG3 332 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.3□□□□□ -1.24
UBBP1-201ENST00000392399 DPH6Q7L8W6 267 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 TRAPPC11Q7Z392 1133 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 FRMD5Q7Z6J6 570 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 PPFIBP1Q86W92 1011 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 EFCAB13Q8IY85 973 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 CSGALNACT2Q8N6G5 542 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 APPL2Q8NEU8 664 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 BCL7CQ8WUZ0 217 aaPredicted RBP7.3□□□□□ -1.24
UBBP1-201ENST00000392399 PIK3R5Q8WYR1 880 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 CCDC127Q96BQ5 260 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 BORCS6Q96GS4 357 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 SUSD3Q96L08 255 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 ZNF560Q96MR9 790 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 CGRRF1Q99675 332 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 TTPALQ9BTX7 342 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 EMILIN2Q9BXX0 1053 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 RXFP1Q9HBX9 757 aa7.3□□□□□ -1.24
UBBP1-201ENST00000392399 ENTPD7Q9NQZ7 604 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms