RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ZSCAN23Q3MJ62 389 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 C9orf57Q5W0N0 161 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 NT5DC4Q86YG4 428 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 EFHBQ8N7U6 833 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 KLHL5Q96PQ7 755 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 FNBP1Q96RU3 617 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 CHST7Q9NS84 486 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 TRAF3IP3Q9Y228 551 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 TCF20Q9UGU0 1960 aaKnown RBP20.96■□□□□ 0.95
GTF3A-201ENST00000381140 MTCL1Q9Y4B5 1905 aaKnown RBP20.96■□□□□ 0.95
GTF3A-201ENST00000381140 PTPRJQ12913 1337 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 NCK2O43639 380 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 NR2F2P24468 414 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 CASP4P49662 377 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 STIM1Q13586 685 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 CLUL1Q15846 466 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 KLHL10Q6JEL2 608 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 DSTYKQ6XUX3 929 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 ANKRD36BP1Q96IX9 119 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 CDCA3Q99618 268 aaPredicted RBP20.96■□□□□ 0.95
GTF3A-201ENST00000381140 GTPBP4Q9BZE4 634 aaKnown RBP20.96■□□□□ 0.95
GTF3A-201ENST00000381140 MTMR12Q9C0I1 747 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
GTF3A-201ENST00000381140 NUP62CLQ9H1M0 184 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 DMAC2Q9NW81 257 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 COG5Q9UP83 839 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 IRAK3Q9Y616 596 aa20.96■□□□□ 0.95
GTF3A-201ENST00000381140 H3BQ06 376 aaPredicted RBP20.95■□□□□ 0.94
GTF3A-201ENST00000381140 LILRB3O75022 631 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 LETM1O95202 739 aaPredicted RBP20.95■□□□□ 0.94
GTF3A-201ENST00000381140 TNNC2P02585 160 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 ITGB3P05106 788 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 KRT19P08727 400 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 TNNI1P19237 187 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 FGFR3P22607 806 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 ADAM15Q13444 863 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 MORC3Q14149 939 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 PSMD6Q15008 389 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 PSMD5Q16401 504 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 SLC9A9Q8IVB4 645 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 ADSSL1Q8N142 457 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 VN1R2Q8NFZ6 395 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 OR5B17Q8NGF7 314 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 POP1Q99575 1024 aaKnown RBP20.95■□□□□ 0.94
GTF3A-201ENST00000381140 TSG101Q99816 390 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 INTS13Q9NVM9 706 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 KIAA1468Q9P260 1216 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 BARX2Q9UMQ3 279 aaPredicted RBP20.95■□□□□ 0.94
GTF3A-201ENST00000381140 FRMD4BQ9Y2L6 1034 aa20.95■□□□□ 0.94
GTF3A-201ENST00000381140 PSMA7O14818 248 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 TEX28O15482 410 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 TBX10O75333 385 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 GLP2RO95838 553 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 ADH1AP07327 375 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 RPL13P26373 211 aaKnown RBP20.94■□□□□ 0.94
GTF3A-201ENST00000381140 POLR2BP30876 1174 aaKnown RBP20.94■□□□□ 0.94
GTF3A-201ENST00000381140 ZNF445P59923 1031 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 DLX2Q07687 328 aaPredicted RBP20.94■□□□□ 0.94
GTF3A-201ENST00000381140 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.94■□□□□ 0.94
GTF3A-201ENST00000381140 CSGALNACT2Q8N6G5 542 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 C1orf127Q8N9H9 656 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 EEF2KMTQ96G04 330 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 SUSD3Q96L08 255 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 CGRRF1Q99675 332 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 AGAP1Q9UPQ3 857 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 R3HCC1Q9Y3T6 440 aaKnown RBP20.94■□□□□ 0.94
GTF3A-201ENST00000381140 TSC2P49815 1807 aa20.94■□□□□ 0.94
GTF3A-201ENST00000381140 ANO9A1A5B4 782 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 TRIM49BA6NDI0 452 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 PIRO00625 290 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 SRGAP2BP0DMP2 458 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 CD44P16070 742 aaKnown RBP20.93■□□□□ 0.94
GTF3A-201ENST00000381140 EPCAMP16422 314 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 BMP6P22004 513 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 ADAM9Q13443 819 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 DUOXA2Q1HG44 320 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 CTC1Q2NKJ3 1217 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 ZCWPW2Q504Y3 356 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 COBLL1Q53SF7 1204 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 RBM43Q6ZSC3 357 aaKnown RBP20.93■□□□□ 0.94
GTF3A-201ENST00000381140 PALB2Q86YC2 1186 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 WDR49Q8IV35 697 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 LNX1Q8TBB1 728 aaPredicted RBP20.93■□□□□ 0.94
GTF3A-201ENST00000381140 PIK3R5Q8WYR1 880 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 MFSD14AQ96MC6 490 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 RXFP1Q9HBX9 757 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.93■□□□□ 0.94
GTF3A-201ENST00000381140 CTNND2Q9UQB3 1225 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 TIMM13Q9Y5L4 95 aaPredicted RBP20.93■□□□□ 0.94
GTF3A-201ENST00000381140 HCFC2Q9Y5Z7 792 aa20.93■□□□□ 0.94
GTF3A-201ENST00000381140 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.92■□□□□ 0.94
GTF3A-201ENST00000381140 FSD2A1L4K1 749 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 SPDYE4A6NLX3 237 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 SPTLC1O15269 473 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 LTBRP36941 435 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 TAF6P49848 677 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 PMS1P54277 932 aaKnown RBP20.92■□□□□ 0.94
GTF3A-201ENST00000381140 LILRA4P59901 499 aa20.92■□□□□ 0.94
GTF3A-201ENST00000381140 CREMQ03060 361 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms