RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.35■□□□□ 0.37
VPS16-203ENST00000380469 AGO2Q9UKV8 859 aaKnown RBP17.35■□□□□ 0.37
VPS16-203ENST00000380469 SCINQ9Y6U3 715 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 BRAFP15056 766 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 KCNA2P16389 499 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 CUL2Q13617 745 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 TDRD10Q5VZ19 366 aaKnown RBP17.35■□□□□ 0.37
VPS16-203ENST00000380469 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 GSTA5Q7RTV2 222 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 ABRAQ8N0Z2 381 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 CCDC63Q8NA47 563 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
VPS16-203ENST00000380469 ATG4CQ96DT6 458 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 CTNNAL1Q9UBT7 734 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 SLC9A2Q9UBY0 812 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 RIPK3Q9Y572 518 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 CD2APQ9Y5K6 639 aa17.35■□□□□ 0.37
VPS16-203ENST00000380469 SUN1O94901 812 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 CREB1P16220 341 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 COL4A5P29400 1685 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 GNA15P30679 374 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 MAMLD1Q13495 774 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 TNFAIP1Q13829 316 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 FAM133BQ5BKY9 247 aaKnown RBP17.34■□□□□ 0.37
VPS16-203ENST00000380469 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 DAB2IPQ5VWQ8 1189 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 SPOPLQ6IQ16 392 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 PASD1Q8IV76 773 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 EXD1Q8NHP7 514 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 MAGEC3Q8TD91 643 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 CDHR1Q96JP9 859 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 TPX2Q9ULW0 747 aaKnown RBP17.34■□□□□ 0.37
VPS16-203ENST00000380469 USTQ9Y2C2 406 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 NEU2Q9Y3R4 380 aa17.34■□□□□ 0.37
VPS16-203ENST00000380469 MGRN1O60291 552 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 ACO1P21399 889 aaKnown RBP17.33■□□□□ 0.37
VPS16-203ENST00000380469 ACOT2P49753 483 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 NLRP11P59045 1033 aaKnown RBP17.33■□□□□ 0.37
VPS16-203ENST00000380469 ELF3P78545 371 aaPredicted RBP17.33■□□□□ 0.37
VPS16-203ENST00000380469 LMNB2Q03252 620 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 CXCL9Q07325 125 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 STAT4Q14765 748 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 MTERF2Q49AM1 385 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 IZUMO3Q5VZ72 239 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 NUGGCQ68CJ6 796 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 HIBCHQ6NVY1 386 aaPredicted RBP17.33■□□□□ 0.37
VPS16-203ENST00000380469 MIS18BP1Q6P0N0 1132 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 TMEM270Q6UE05 265 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 CKAP2Q8WWK9 683 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 FGFR1OP2Q9NVK5 253 aa17.33■□□□□ 0.37
VPS16-203ENST00000380469 NFASCO94856 1347 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 GSTTP1A0A1W2PQM5 241 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 CFAP73A6NFT4 308 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 CDH16O75309 829 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 GJC1P36383 396 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 POLGP54098 1239 aaPredicted RBP17.33■□□□□ 0.36
VPS16-203ENST00000380469 TAS2R40P59535 323 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 ACTR2P61160 394 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 NOMO3P69849 1222 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 XKR3Q5GH77 459 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 SLFN12LQ6IEE8 588 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 PHF13Q86YI8 300 aaPredicted RBP17.33■□□□□ 0.36
VPS16-203ENST00000380469 CCDC60Q8IWA6 550 aaPredicted RBP17.33■□□□□ 0.36
VPS16-203ENST00000380469 PLCD4Q9BRC7 762 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 NKIRAS1Q9NYS0 192 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 LGALS13Q9UHV8 139 aa17.33■□□□□ 0.36
VPS16-203ENST00000380469 TLR3O15455 904 aaKnown RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 OAS1P00973 400 aaKnown RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 CD58P19256 250 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 STX2P32856 288 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 DSG3P32926 999 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 SNRNP48Q6IEG0 339 aaKnown RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 PLEKHA7Q6IQ23 1121 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 ARHGEF18Q6ZSZ5 1173 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 RELL1Q8IUW5 271 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 TEPSINQ96N21 525 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 PWWP2AQ96N64 755 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 FAM118BQ9BPY3 351 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 FOXP3Q9BZS1 431 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 PARVAQ9NVD7 372 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 RBAKQ9NYW8 714 aaPredicted RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 TBK1Q9UHD2 729 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 NAALADL1Q9UQQ1 740 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 STYXL1Q9Y6J8 313 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 WDR81Q562E7 1941 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 O00370 1275 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 VNN1O95497 513 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 LDHAP00338 332 aaKnown RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 TBXAS1P24557 533 aaPredicted RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 SLC8A1P32418 973 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 MKRN3Q13064 507 aaKnown RBP17.32■□□□□ 0.36
VPS16-203ENST00000380469 EMC2Q15006 297 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 ABHD15Q6UXT9 468 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 CEP57Q86XR8 500 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 GDAP1Q8TB36 358 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 FEZF2Q8TBJ5 459 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 CCHCR1Q8TD31 782 aa17.32■□□□□ 0.36
VPS16-203ENST00000380469 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms