RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CDR2Q01850 454 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 MFSD10Q14728 455 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 CYP4F22Q6NT55 531 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 ZNF410Q86VK4 478 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 HHIPL1Q96JK4 782 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 FAM49AQ9H0Q0 323 aaPredicted RBP20.8■□□□□ 0.92
SSU72-204ENST00000378726 THAP2Q9H0W7 228 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 PDZD7Q9H5P4 517 aa20.8■□□□□ 0.92
SSU72-204ENST00000378726 KIF3CO14782 793 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 RTN2O75298 545 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 MCF2P10911 925 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 GZMAP12544 262 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 PSMC4P43686 418 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 NOP14P78316 857 aaKnown RBP20.79■□□□□ 0.92
SSU72-204ENST00000378726 ITIH3Q06033 890 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 SKIDA1Q1XH10 827 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 KIZQ2M2Z5 673 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 FAM76AQ8TAV0 307 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 KAT6AQ92794 2004 aa20.79■□□□□ 0.92
SSU72-204ENST00000378726 GOLGA6CA6NDK9 693 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 B4GALT4O60513 344 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 CLTAP09496 248 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 GOLGA6DP0CG33 693 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 STAG3L1P0CL83 205 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 TMEM62Q0P6H9 643 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 LRRC57Q8N9N7 239 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 RFFLQ8WZ73 363 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 DDX1Q92499 740 aaKnown RBP20.78■□□□□ 0.92
SSU72-204ENST00000378726 IMPG2Q9BZV3 1241 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 OSGEPQ9NPF4 335 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 GOLGA6AQ9NYA3 693 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 PACSIN2Q9UNF0 486 aaPredicted RBP20.78■□□□□ 0.92
SSU72-204ENST00000378726 GINS2Q9Y248 185 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 SHOX2O60902 331 aaPredicted RBP20.78■□□□□ 0.92
SSU72-204ENST00000378726 ERLIN2O94905 339 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 TMEM191BP0C7N4 346 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 CXCL8P10145 99 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 PSEN2P49810 448 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 ARHGEF26Q96DR7 871 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 ARHGAP39Q9C0H5 1083 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 GOLPH3Q9H4A6 298 aa20.78■□□□□ 0.92
SSU72-204ENST00000378726 ASS1P00966 412 aaKnown RBP20.77■□□□□ 0.92
SSU72-204ENST00000378726 CALCAP01258 141 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 ACO1P21399 889 aaKnown RBP20.77■□□□□ 0.92
SSU72-204ENST00000378726 TBXAS1P24557 533 aaPredicted RBP20.77■□□□□ 0.92
SSU72-204ENST00000378726 DNA2P51530 1060 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 FCGRTP55899 365 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 BPIFB4P59827 614 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 MYL6P60660 151 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 CDC42EP1Q00587 391 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 TRPC3Q13507 836 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 EFCAB13Q8IY85 973 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 ADAMTS10Q9H324 1103 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 PCDHB4Q9Y5E5 795 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 PCDHB2Q9Y5E7 798 aa20.77■□□□□ 0.92
SSU72-204ENST00000378726 HAS3O00219 553 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 TSPAN1O60635 241 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 IL18RAPO95256 599 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 CYP2C9P11712 490 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 AKR1A1P14550 325 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 FGFR4P22455 802 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 SGSM1Q2NKQ1 1148 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 TSEN2Q8NCE0 465 aaKnown RBP20.77■□□□□ 0.91
SSU72-204ENST00000378726 ANKRD36BP1Q96IX9 119 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 NCANO14594 1321 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 UMODL1Q5DID0 1318 aa20.77■□□□□ 0.91
SSU72-204ENST00000378726 A0A1B0GUA9 196 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 SMIM35A0A1B0GVV1 85 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 MBLAC1A4D2B0 266 aaPredicted RBP20.76■□□□□ 0.91
SSU72-204ENST00000378726 LACTBL1A8MY62 500 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 TNNC2P02585 160 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 MAGEA9P43362 315 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 CORO7P57737 925 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 GPC5P78333 572 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 HIC1Q14526 733 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 RPS6KA1Q15418 735 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 FSCN1Q16658 493 aaKnown RBP20.76■□□□□ 0.91
SSU72-204ENST00000378726 CCDC181Q5TID7 509 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 SLFN11Q7Z7L1 901 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 DAAM2Q86T65 1068 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 TRPV1Q8NER1 839 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 GABRQQ9UN88 632 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 GPR32O75388 356 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 ALDH1A1P00352 501 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 TMEM270Q6UE05 265 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 SYCE1Q8N0S2 351 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 MS4A14Q96JA4 679 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 GCOM2Q9BZD3 368 aaPredicted RBP20.76■□□□□ 0.91
SSU72-204ENST00000378726 CDHR5Q9HBB8 845 aa20.76■□□□□ 0.91
SSU72-204ENST00000378726 IRAK1P51617 712 aa20.75■□□□□ 0.91
SSU72-204ENST00000378726 ADAM17P78536 824 aa20.75■□□□□ 0.91
SSU72-204ENST00000378726 LACTBP83111 547 aaPredicted RBP20.75■□□□□ 0.91
SSU72-204ENST00000378726 RUFY4Q6ZNE9 571 aa20.75■□□□□ 0.91
SSU72-204ENST00000378726 RUBCNQ92622 972 aa20.75■□□□□ 0.91
SSU72-204ENST00000378726 RBM12Q9NTZ6 932 aaKnown RBP20.75■□□□□ 0.91
SSU72-204ENST00000378726 DUSP11O75319 330 aaKnown RBP20.74■□□□□ 0.91
SSU72-204ENST00000378726 PAFAH1B1P43034 410 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 FLT3LGP49771 235 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 PTPROQ16827 1216 aa20.74■□□□□ 0.91
SSU72-204ENST00000378726 PEX26Q7Z412 305 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms