RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 KPNA6O60684 536 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 ITGB3P05106 788 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 STAG3L1P0CL83 205 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 HIF1AQ16665 826 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 MPZL3Q6UWV2 235 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 RMDN1Q96DB5 314 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 ZNF512Q96ME7 567 aaPredicted RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 MMTAG2Q9BU76 263 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 GPRC5CQ9NQ84 441 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 INTUQ9ULD6 942 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
CLSTN1-202ENST00000377298 RSPH10B2B2RC85 870 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 PRRG1O14668 218 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 STRNO43815 780 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 RSPH10BP0C881 870 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 ESRRAP11474 423 aaPredicted RBP18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 ANO4Q32M45 955 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 RAPGEF5Q92565 580 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 AKT1S1Q96B36 256 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 ZC3H4Q9UPT8 1303 aaKnown RBP18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 VWA5AO00534 786 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 CLCN3P51790 818 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 SESN3P58005 492 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 ZBTB18Q99592 522 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 PI4K2AQ9BTU6 479 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 DPP3Q9NY33 737 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 SUN2Q9UH99 717 aa18.83■□□□□ 0.61
CLSTN1-202ENST00000377298 KCNN4O15554 427 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 NSUN2Q08J23 767 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 CUL2Q13617 745 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 TTC23LQ6PF05 361 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 ARRDC4Q8NCT1 418 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 G3BP2Q9UN86 482 aaKnown RBP18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 C3orf70A6NLC5 250 aaPredicted RBP18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 PHF2O75151 1096 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 DCTN3O75935 186 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 SNCBQ16143 134 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 SERPINI1Q99574 410 aa18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 SEPT5Q99719 369 aaPredicted RBP18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 DBR1Q9UK59 544 aaKnown RBP18.83■□□□□ 0.6
CLSTN1-202ENST00000377298 MANSC4A6NHS7 340 aaPredicted RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 F5H423 210 aaPredicted RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 CYP2C8P10632 490 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 RASSF3Q86WH2 238 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GBP7Q8N8V2 638 aaPredicted RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 TRPC7Q9HCX4 862 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 DYRK4Q9NR20 520 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GUCY2CP25092 1073 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 KLRC1P26715 233 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 PGM5Q15124 567 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 P3H1Q32P28 736 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 RAD9BQ6WBX8 426 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GSTA4O15217 222 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 ZC3H11AO75152 810 aaKnown RBP eCLIP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 FAM200BP0CF97 657 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 MAGOHP61326 146 aaKnown RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GOLGA7BQ2TAP0 167 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 MGAT5BQ3V5L5 792 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 NIPA1Q7RTP0 329 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GPD1P21695 349 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GGCXP38435 758 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 GSPT2Q8IYD1 628 aaKnown RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 PPWD1Q96BP3 646 aaKnown RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 KLHL11Q9NVR0 708 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 CPA4Q9UI42 421 aa18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.82■□□□□ 0.6
CLSTN1-202ENST00000377298 MYO1CO00159 1063 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 PDHXO00330 501 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 ODC1P11926 461 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 STAT4Q14765 748 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 COLEC11Q9BWP8 271 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 ACTR5Q9H9F9 607 aaPredicted RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 FGFR1OP2Q9NVK5 253 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.81■□□□□ 0.63e-9■■□□□ 13.3
CLSTN1-202ENST00000377298 KIAA1257Q9ULG3 409 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 GAKO14976 1311 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 BRAFP15056 766 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 CDR2LQ86X02 465 aaPredicted RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 EEF2KO00418 725 aaKnown RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 MYBPC2Q14324 1141 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 ATPAF2Q8N5M1 289 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 APOBEC2Q9Y235 224 aaKnown RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 ADGRB2O60241 1585 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 PPATQ06203 517 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 NCAPHQ15003 741 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 FAM133BQ5BKY9 247 aaKnown RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 MAP1SQ66K74 1059 aaPredicted RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 USP50Q70EL3 339 aaPredicted RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 CDC26Q8NHZ8 85 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 FEZF2Q8TBJ5 459 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 TMC2Q8TDI7 906 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 PPP1R2P1Q96PQ5 205 aa18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 IRX2Q9BZI1 471 aaPredicted RBP18.81■□□□□ 0.6
CLSTN1-202ENST00000377298 TFRCP02786 760 aaKnown RBP18.8■□□□□ 0.6
CLSTN1-202ENST00000377298 ARHGEF26Q96DR7 871 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms