RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CCDC77Q9BR77 488 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 OSBPL8Q9BZF1 889 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 RPAP3Q9H6T3 665 aaPredicted RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 MRPL47Q9HD33 250 aaKnown RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 XPNPEP1Q9NQW7 623 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 SEPT9Q9UHD8 586 aaPredicted RBP15.47■□□□□ 0.07
MSH5-201ENST00000375703 GGT7Q9UJ14 662 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 NAALADL1Q9UQQ1 740 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 USTQ9Y2C2 406 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 NEU2Q9Y3R4 380 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 RIPK3Q9Y572 518 aa15.47■□□□□ 0.07
MSH5-201ENST00000375703 PSTPIP1O43586 416 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 SUN1O94901 812 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 OAS1P00973 400 aaKnown RBP15.46■□□□□ 0.07
MSH5-201ENST00000375703 POTEJP0CG39 1038 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
MSH5-201ENST00000375703 ACOT2P49753 483 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 RTP1P59025 263 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 CLDN10P78369 228 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 MPP2Q14168 576 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 PSMD6Q15008 389 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 PREPLQ4J6C6 727 aaPredicted RBP15.46■□□□□ 0.07
MSH5-201ENST00000375703 TBC1D1Q86TI0 1168 aaPredicted RBP15.46■□□□□ 0.07
MSH5-201ENST00000375703 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.07
MSH5-201ENST00000375703 ARHGAP28Q9P2N2 729 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 PCDHB4Q9Y5E5 795 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 DSG3P32926 999 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 GJC1P36383 396 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 MAMLD1Q13495 774 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
MSH5-201ENST00000375703 IZUMO3Q5VZ72 239 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 GSTA5Q7RTV2 222 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 CYP26B1Q9NR63 512 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 RNF146Q9NTX7 359 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 TELO2Q9Y4R8 837 aa15.46■□□□□ 0.07
MSH5-201ENST00000375703 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.06
MSH5-201ENST00000375703 H0YCG3 227 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 VWA5AO00534 786 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 UBOX5O94941 541 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 BRD2P25440 801 aaKnown RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 MTMR2Q13614 643 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 WLSQ5T9L3 541 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 TMEM270Q6UE05 265 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ABRAQ8N0Z2 381 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 TCP11Q8WWU5 503 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 C9orf72Q96LT7 481 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 BAIAP2L1Q9UHR4 511 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 AGO2Q9UKV8 859 aaKnown RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 GSTTP1A0A1W2PQM5 241 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 CFAP73A6NFT4 308 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 CDH16O75309 829 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ATP6V1G2O95670 118 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 GH1P01241 217 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 CLTAP09496 248 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 FDX1P10109 184 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 CETPP11597 493 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 KCNA2P16389 499 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 CD58P19256 250 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ACO1P21399 889 aaKnown RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 SLC8A1P32418 973 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 STX2P32856 288 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 WNT7BP56706 349 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 NLRP11P59045 1033 aaKnown RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 STRN3Q13033 797 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 TRIM72Q6ZMU5 477 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ATG4CQ96DT6 458 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ZBED3Q96IU2 234 aaPredicted RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 VCPIP1Q96JH7 1222 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 AGAP1Q9UPQ3 857 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 TLR3O15455 904 aaKnown RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 VNN1O95497 513 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 GNA15P30679 374 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 NOMO3P69849 1222 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 PRKCEQ02156 737 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 CUL2Q13617 745 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 STAT4Q14765 748 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ARHGEF18Q6ZSZ5 1173 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 PRUNE1Q86TP1 453 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 PNMA8AQ86V59 439 aaPredicted RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 SRRM1Q8IYB3 904 aaKnown RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 GPATCH11Q8N954 259 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 EXD1Q8NHP7 514 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 WNK4Q96J92 1243 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 MYCBPQ99417 103 aaPredicted RBP15.45■□□□□ 0.06
MSH5-201ENST00000375703 NKIRAS1Q9NYS0 192 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 LGALS13Q9UHV8 139 aa15.45■□□□□ 0.06
MSH5-201ENST00000375703 ZNFX1Q9P2E3 1918 aaKnown RBP15.44■□□□□ 0.06
MSH5-201ENST00000375703 ABCD1P33897 745 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 CETN2P41208 172 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 ADCY1Q08828 1119 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 MTERF2Q49AM1 385 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 PLEKHA7Q6IQ23 1121 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 SPATA21Q7Z572 469 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 CCDC60Q8IWA6 550 aaPredicted RBP15.44■□□□□ 0.06
MSH5-201ENST00000375703 FAM212AQ96EL1 285 aa15.44■□□□□ 0.06
MSH5-201ENST00000375703 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
MSH5-201ENST00000375703 SLC9A2Q9UBY0 812 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms