RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 GORASP2Q9H8Y8 452 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 ANAPC5Q9UJX4 755 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 SOX13Q9UN79 622 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 CRYL1Q9Y2S2 319 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PCDHB12Q9Y5F1 795 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 CAPN7Q9Y6W3 813 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 K7EPI3 171 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 CYP1A1P04798 512 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 HSMCR30P0CW71 290 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 MAPKAPK2P49137 400 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 SSTP61278 116 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PURAQ00577 322 aaKnown RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 ITKQ08881 620 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 MAPRE2Q15555 327 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 ECM1Q16610 540 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 GFOD2Q3B7J2 385 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 C1orf185Q5T7R7 199 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 ZNF321PQ8N8H1 164 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 SCAIQ8N9R8 606 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 HES6Q96HZ4 224 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 COQ7Q99807 217 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 NUF2Q9BZD4 464 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PITHD1Q9GZP4 211 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
USP48-203ENST00000374732 GPR34Q9UPC5 381 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 PCDHGA3Q9Y5H0 932 aa8.41□□□□□ -1.06
USP48-203ENST00000374732 TYW5A2RUC4 315 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 RRN3P2A6NIE6 340 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 EBAG9O00559 213 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ALDH2P05091 517 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 GNAI3P08754 354 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 DLATP10515 647 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 SERPINB6P35237 376 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 STAT1P42224 750 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 USP46P62068 366 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 TBX2Q13207 712 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 CWF19L2Q2TBE0 894 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 ARL13BQ3SXY8 428 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 CRTC2Q53ET0 693 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 TTC22Q5TAA0 569 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ANKS3Q6ZW76 656 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 KLHDC4Q8TBB5 520 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 MPHOSPH8Q99549 860 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 NDNQ99608 321 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ADPGKQ9BRR6 497 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 TRIM62Q9BVG3 475 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 SPZ1Q9BXG8 430 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 TRIM55Q9BYV6 548 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 PAIP1Q9H074 479 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 PRM3Q9NNZ6 103 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 IARS2Q9NSE4 1012 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 RWDD3Q9Y3V2 267 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ADAMTS7Q9UKP4 1686 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ABHD14A-ACY1A0A1B0GW23 586 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 STX16-NPEPL1H3BU86 382 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ENO2P09104 434 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 PORP16435 677 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 GAP43P17677 238 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 GBP1P32455 592 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 MAPK8P45983 427 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 KCNJ6P48051 423 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 IFNAR2P48551 515 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 MLLT6P55198 1093 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 TRAP1Q12931 704 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 ARSHQ5FYA8 562 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 KIF6Q6ZMV9 814 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 PALM2Q8IXS6 379 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 ZNF527Q8NB42 609 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 FBXO15Q8NCQ5 510 aaPredicted RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 FERMT2Q96AC1 680 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 PPM1MQ96MI6 270 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 TDRD1Q9BXT4 1180 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 C12orf10Q9HB07 376 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 FANCEQ9HB96 536 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 RASSF1Q9NS23 344 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 SLC39A1Q9NY26 324 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 IL37Q9NZH6 218 aa8.4□□□□□ -1.06
USP48-203ENST00000374732 SCAF8Q9UPN6 1271 aaKnown RBP8.4□□□□□ -1.06
USP48-203ENST00000374732 CYP3A7-CYP3A51PA0A087WV96 503 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 MAGEB16A2A368 324 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 KRT87PA6NCN2 255 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 MYO1FO00160 1098 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 BAG2O95816 211 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 GNAI2P04899 355 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 CHRNB1P11230 501 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 KRT4P19013 534 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 ATP4AP20648 1035 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 KELP23276 732 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 CYP3A7P24462 503 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 SLC26A5P58743 744 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 GCNT1Q02742 428 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 GOLGA8FQ08AF8 430 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 GOLGA8DPQ0D2H9 430 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 CYLC2Q14093 348 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms