RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 ATP6V0A4Q9HBG4 840 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 NOD2Q9HC29 1040 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 NINJ2Q9NZG7 142 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 ADAM22Q9P0K1 906 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 GABBR1Q9UBS5 961 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 C21orf2O43822 256 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 VPS41P49754 854 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 IL9RQ01113 521 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 MAP3K10Q02779 954 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 SF3A3Q12874 501 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPN20-204ENST00000374346 KLF1Q13351 362 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-204ENST00000374346 IZUMO3Q5VZ72 239 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 C15orf39Q6ZRI6 1047 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 MON1BQ7L1V2 547 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 TBC1D1Q86TI0 1168 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-204ENST00000374346 TTC25Q96NG3 672 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 GMLQ99445 158 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 HEMGNQ9BXL5 484 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 TRIM7Q9C029 511 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 MTFR1LQ9H019 292 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 GINM1Q9NU53 330 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 ABCF3Q9NUQ8 709 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 ABHD2P08910 425 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 TBXAS1P24557 533 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-204ENST00000374346 COPS2P61201 443 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 CLDN10P78369 228 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-204ENST00000374346 PSMD6Q15008 389 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 ZACNQ401N2 412 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 BSNDQ8WZ55 320 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 RXFP1Q9HBX9 757 aa12.12□□□□□ -0.47
PTPN20-204ENST00000374346 ARID2Q68CP9 1835 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 UBOX5O94941 541 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 GJB6O95452 261 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 GNA15P30679 374 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 SLFN12LQ6IEE8 588 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 SRRM1Q8IYB3 904 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 GDAP1Q8TB36 358 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 RBM41Q96IZ5 413 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 RBM15Q96T37 977 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 CXorf56Q9H5V9 222 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 UBN1Q9NPG3 1134 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 PARVAQ9NVD7 372 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 CTNNAL1Q9UBT7 734 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 TBK1Q9UHD2 729 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 IP6K2Q9UHH9 426 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 MCM8Q9UJA3 840 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 NAALADL1Q9UQQ1 740 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 RASA4BC9J798 803 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ATP2A1O14983 1001 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 RASA4O43374 803 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 TJP3O95049 919 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 LDHAP00338 332 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 HLA-DRAP01903 254 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 NQO1P15559 274 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 MAMLD1Q13495 774 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 FAM228AQ86W67 206 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 PHF13Q86YI8 300 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ZCCHC9Q8N567 271 aaKnown RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 KLHL29Q96CT2 875 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 C11orf70Q9BRQ4 267 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-204ENST00000374346 PCDHB4Q9Y5E5 795 aa12.11□□□□□ -0.47
PTPN20-204ENST00000374346 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
PTPN20-204ENST00000374346 FAM47DPA6NHR8 397 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 MAGEA4P43358 317 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 BNIP1Q12981 228 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 CUL2Q13617 745 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 E2F5Q15329 346 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 P3H1Q32P28 736 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 TMEM270Q6UE05 265 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 PHLDB2Q86SQ0 1253 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 VSIG10LQ86VR7 867 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 JPH1Q9HDC5 661 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-204ENST00000374346 CYP26B1Q9NR63 512 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 SENP1Q9P0U3 644 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 AGO2Q9UKV8 859 aaKnown RBP12.1□□□□□ -0.47
PTPN20-204ENST00000374346 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
PTPN20-204ENST00000374346 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
PTPN20-204ENST00000374346 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms