RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 C9orf57Q5W0N0 161 aa20.02■□□□□ 0.8
CDX4-201ENST00000373514 FUT10Q6P4F1 479 aa20.02■□□□□ 0.8
CDX4-201ENST00000373514 DDX53Q86TM3 631 aaKnown RBP20.02■□□□□ 0.8
CDX4-201ENST00000373514 RNF168Q8IYW5 571 aaPredicted RBP20.02■□□□□ 0.8
CDX4-201ENST00000373514 ZNF516Q92618 1163 aa20.02■□□□□ 0.8
CDX4-201ENST00000373514 FNBP1Q96RU3 617 aa20.02■□□□□ 0.8
CDX4-201ENST00000373514 ZBP1Q9H171 429 aa20.02■□□□□ 0.8
CDX4-201ENST00000373514 RWDD2AQ9UIY3 292 aa20.02■□□□□ 0.8
CDX4-201ENST00000373514 GOLGA6L19H0YKK7 550 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 KRT17Q04695 432 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 PLPP4Q5VZY2 271 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 NT5DC4Q86YG4 428 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 VPS52Q8N1B4 723 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 MICALL1Q8N3F8 863 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 CSGALNACT2Q8N6G5 542 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 CXorf38Q8TB03 319 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 TSPAN18Q96SJ8 248 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 GAS2L1Q99501 681 aaPredicted RBP20.02■□□□□ 0.79
CDX4-201ENST00000373514 HERC2P3Q9BVR0 1158 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 TLR9Q9NR96 1032 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 SIX4Q9UIU6 781 aa20.02■□□□□ 0.79
CDX4-201ENST00000373514 TMEM189-UBE2V1I3L0A0 370 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 MAPK13O15264 365 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 TADA2AO75478 443 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 EPB41P11171 864 aaKnown RBP20.01■□□□□ 0.79
CDX4-201ENST00000373514 FOSL2P15408 326 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 POLR2BP30876 1174 aaKnown RBP20.01■□□□□ 0.79
CDX4-201ENST00000373514 RPL9P32969 192 aaKnown RBP20.01■□□□□ 0.79
CDX4-201ENST00000373514 BFSP1Q12934 665 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 SURF1Q15526 300 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 DCLRE1AQ6PJP8 1040 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 ADGRD2Q7Z7M1 963 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 MRPL38Q96DV4 380 aaKnown RBP20.01■□□□□ 0.79
CDX4-201ENST00000373514 DDX27Q96GQ7 796 aaKnown RBP20.01■□□□□ 0.79
CDX4-201ENST00000373514 BORCS6Q96GS4 357 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 ANKRD36BP1Q96IX9 119 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 TCF25Q9BQ70 676 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 LZTS1Q9Y250 596 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 MTCH2Q9Y6C9 303 aa20.01■□□□□ 0.79
CDX4-201ENST00000373514 SF3B1O75533 1304 aaKnown RBP eCLIP20■□□□□ 0.79
CDX4-201ENST00000373514 ANO9A1A5B4 782 aa20■□□□□ 0.79
CDX4-201ENST00000373514 SMTNL1A8MU46 457 aa20■□□□□ 0.79
CDX4-201ENST00000373514 FSCN2O14926 492 aa20■□□□□ 0.79
CDX4-201ENST00000373514 SPTLC1O15269 473 aa20■□□□□ 0.79
CDX4-201ENST00000373514 SLC16A3O15427 465 aaKnown RBP20■□□□□ 0.79
CDX4-201ENST00000373514 KRT19P08727 400 aa20■□□□□ 0.79
CDX4-201ENST00000373514 CA8P35219 290 aa20■□□□□ 0.79
CDX4-201ENST00000373514 VAMP7P51809 220 aa20■□□□□ 0.79
CDX4-201ENST00000373514 UBE3AQ05086 875 aa20■□□□□ 0.79
CDX4-201ENST00000373514 CT47A1Q5JQC4 288 aaPredicted RBP20■□□□□ 0.79
CDX4-201ENST00000373514 MKNK1Q9BUB5 465 aa20■□□□□ 0.79
CDX4-201ENST00000373514 SRRTQ9BXP5 876 aaKnown RBP20■□□□□ 0.79
CDX4-201ENST00000373514 MMRN2Q9H8L6 949 aa20■□□□□ 0.79
CDX4-201ENST00000373514 ENTPD7Q9NQZ7 604 aa20■□□□□ 0.79
CDX4-201ENST00000373514 CARNS1A5YM72 827 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 PIRO00625 290 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 IKBKBO14920 756 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 TNNC2P02585 160 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 SOD2P04179 222 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 TIGD5Q53EQ6 642 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 RTP2Q5QGT7 225 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 TDRD10Q5VZ19 366 aaKnown RBP19.99■□□□□ 0.79
CDX4-201ENST00000373514 FOXR2Q6PJQ5 311 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 INTS8Q75QN2 995 aaKnown RBP19.99■□□□□ 0.79
CDX4-201ENST00000373514 TMC2Q8TDI7 906 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 CACTINQ8WUQ7 758 aaKnown RBP19.99■□□□□ 0.79
CDX4-201ENST00000373514 CEP63Q96MT8 703 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 LMAN2LQ9H0V9 348 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 AGAP1Q9UPQ3 857 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 NUB1Q9Y5A7 615 aa19.99■□□□□ 0.79
CDX4-201ENST00000373514 HIDE1A8MVS5 230 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 C2CD2LO14523 706 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 KRT13P13646 458 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 ERCC5P28715 1186 aaPredicted RBP19.98■□□□□ 0.79
CDX4-201ENST00000373514 TKTP29401 623 aaKnown RBP19.98■□□□□ 0.79
CDX4-201ENST00000373514 CLDN10P78369 228 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 MYL5Q02045 173 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 NCAPHQ15003 741 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 CCDC40Q4G0X9 1142 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 DCAF17Q5H9S7 520 aaPredicted RBP19.98■□□□□ 0.79
CDX4-201ENST00000373514 FAM171A1Q5VUB5 890 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 TRAPPC11Q7Z392 1133 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 TMC7Q7Z402 723 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 ELMO3Q96BJ8 720 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 PUF60Q9UHX1 559 aaKnown RBP19.98■□□□□ 0.79
CDX4-201ENST00000373514 ITGA11Q9UKX5 1188 aa19.98■□□□□ 0.79
CDX4-201ENST00000373514 GLUD2P49448 558 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 PPP3CAQ08209 521 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 BIRC3Q13489 604 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 PTPN14Q15678 1187 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 PTPROQ16827 1216 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 DUOXA2Q1HG44 320 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 HSP90AA4PQ58FG1 418 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 PRSS55Q6UWB4 352 aaPredicted RBP19.97■□□□□ 0.79
CDX4-201ENST00000373514 FILIP1Q7Z7B0 1213 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 CEP57Q86XR8 500 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 MICAL1Q8TDZ2 1067 aa19.97■□□□□ 0.79
CDX4-201ENST00000373514 ANP32BQ92688 251 aaKnown RBP19.97■□□□□ 0.79
CDX4-201ENST00000373514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.97■□□□□ 0.79
CDX4-201ENST00000373514 VNN1O95497 513 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms