RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ALG6Q9Y672 507 aa26.73■■□□□ 1.87
CTSA-203ENST00000372459 ATMINO43313 823 aaPredicted RBP26.72■■□□□ 1.87
CTSA-203ENST00000372459 RNASE9P60153 205 aaKnown RBP26.72■■□□□ 1.87
CTSA-203ENST00000372459 CRHR2Q13324 411 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 MFSD10Q14728 455 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 ZNF699Q32M78 642 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 SMYD5Q6GMV2 418 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 ZNF564Q8TBZ8 553 aaPredicted RBP26.72■■□□□ 1.87
CTSA-203ENST00000372459 LENG1Q96BZ8 264 aaPredicted RBP26.72■■□□□ 1.87
CTSA-203ENST00000372459 TRIM11Q96F44 468 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 ADPGKQ9BRR6 497 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 AP5M1Q9H0R1 490 aa26.72■■□□□ 1.87
CTSA-203ENST00000372459 PGRMC1O00264 195 aaKnown RBP26.71■■□□□ 1.87
CTSA-203ENST00000372459 DDX3YO15523 660 aaKnown RBP26.71■■□□□ 1.87
CTSA-203ENST00000372459 CYP1A1P04798 512 aaPredicted RBP26.71■■□□□ 1.87
CTSA-203ENST00000372459 C8orf74Q6P047 294 aa26.71■■□□□ 1.87
CTSA-203ENST00000372459 RASGEF1CQ8N431 466 aa26.71■■□□□ 1.87
CTSA-203ENST00000372459 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.71■■□□□ 1.871e-6■■■□□ 18.7
CTSA-203ENST00000372459 ASB7Q9H672 318 aa26.71■■□□□ 1.87
CTSA-203ENST00000372459 CNOT8Q9UFF9 292 aaKnown RBP26.71■■□□□ 1.87
CTSA-203ENST00000372459 A0A1B0GUA9 196 aa26.71■■□□□ 1.87
CTSA-203ENST00000372459 LACTBL1A8MY62 500 aa26.71■■□□□ 1.87
CTSA-203ENST00000372459 SASH3O75995 380 aa26.71■■□□□ 1.87
CTSA-203ENST00000372459 MYBL1P10243 752 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 NSFP46459 744 aaKnown RBP26.7■■□□□ 1.86
CTSA-203ENST00000372459 ZNF132P52740 706 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 CENPCQ03188 943 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 KIZQ2M2Z5 673 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 MAP9Q49MG5 647 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 RPS6KC1Q96S38 1066 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 GCOM2Q9BZD3 368 aaPredicted RBP26.7■■□□□ 1.86
CTSA-203ENST00000372459 FAM49AQ9H0Q0 323 aaPredicted RBP26.7■■□□□ 1.86
CTSA-203ENST00000372459 XYLT2Q9H1B5 865 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 ADAMTS10Q9H324 1103 aa26.7■■□□□ 1.86
CTSA-203ENST00000372459 CHORDC1Q9UHD1 332 aaPredicted RBP26.7■■□□□ 1.86
CTSA-203ENST00000372459 SMIM35A0A1B0GVV1 85 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 MBLAC1A4D2B0 266 aaPredicted RBP26.69■■□□□ 1.86
CTSA-203ENST00000372459 MIF4GDA9UHW6 222 aaKnown RBP26.69■■□□□ 1.86
CTSA-203ENST00000372459 IGHA2P01877 340 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 NFICP08651 508 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 PPP1R2P3Q6NXS1 205 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 MCOLN2Q8IZK6 566 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 FUT8Q9BYC5 575 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 TMEM59LQ9UK28 342 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 THAP12O43422 761 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 PSEN2P49810 448 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 TNNC1P63316 161 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 MESDQ14696 234 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 NAA35Q5VZE5 725 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 JADE1Q6IE81 842 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 CPA5Q8WXQ8 436 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 CYFIP2Q96F07 1278 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 CARD9Q9H257 536 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 AVENQ9NQS1 362 aaPredicted RBP26.69■■□□□ 1.86
CTSA-203ENST00000372459 CISHQ9NSE2 258 aa26.69■■□□□ 1.86
CTSA-203ENST00000372459 NOC2LQ9Y3T9 749 aaKnown RBP26.69■■□□□ 1.86
CTSA-203ENST00000372459 MGAMO43451 1857 aa26.68■■□□□ 1.86
CTSA-203ENST00000372459 KRT19P08727 400 aa26.68■■□□□ 1.86
CTSA-203ENST00000372459 CYP2C9P11712 490 aa26.68■■□□□ 1.86
CTSA-203ENST00000372459 YWHAEP62258 255 aaKnown RBP26.68■■□□□ 1.86
CTSA-203ENST00000372459 TTC7AQ9ULT0 858 aaPredicted RBP26.68■■□□□ 1.86
CTSA-203ENST00000372459 ABT1Q9ULW3 272 aaKnown RBP26.68■■□□□ 1.86
CTSA-203ENST00000372459 L1RE1Q9UN81 338 aa26.68■■□□□ 1.86
CTSA-203ENST00000372459 TMEM110-MUSTN1A8MSY1 372 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 HAS3O00219 553 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 GPR32O75388 356 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 MYL3P08590 195 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 CD58P19256 250 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 TM4SF4P48230 202 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 SLC10A6Q3KNW5 377 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 APBB1IPQ7Z5R6 666 aaPredicted RBP26.67■■□□□ 1.86
CTSA-203ENST00000372459 UBL4BQ8N7F7 174 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 C1orf127Q8N9H9 656 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 FAXDC2Q96IV6 333 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 ACAP3Q96P50 834 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 KATNAL1Q9BW62 490 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 STIM2Q9P246 746 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 MEFVO15553 781 aaPredicted RBP26.67■■□□□ 1.86
CTSA-203ENST00000372459 CA12O43570 354 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 ZMYND10O75800 440 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 ASPAP45381 313 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 IRX5P78411 483 aaPredicted RBP26.67■■□□□ 1.86
CTSA-203ENST00000372459 TMEM62Q0P6H9 643 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 DCAF4L1Q3SXM0 396 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 CCNI2Q6ZMN8 369 aaPredicted RBP26.67■■□□□ 1.86
CTSA-203ENST00000372459 HDXQ7Z353 690 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 HDAC7Q8WUI4 952 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 DMGDHQ9UI17 866 aaKnown RBP26.67■■□□□ 1.86
CTSA-203ENST00000372459 SIX4Q9UIU6 781 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 GINS2Q9Y248 185 aa26.67■■□□□ 1.86
CTSA-203ENST00000372459 MROH7Q68CQ1 1323 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 COMTP21964 271 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 FGFR4P22455 802 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 NOMO3P69849 1222 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 PCBP1Q15365 356 aaKnown RBP eCLIP26.66■■□□□ 1.861e-6■■□□□ 13.4
CTSA-203ENST00000372459 ZNF606Q8WXB4 792 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 KRT12Q99456 494 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 AKR1A1P14550 325 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 BEX3Q00994 111 aa26.66■■□□□ 1.86
CTSA-203ENST00000372459 ZNF667Q5HYK9 610 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms