RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 C9orf57Q5W0N0 161 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 PDE12Q6L8Q7 609 aaKnown RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 INTS8Q75QN2 995 aaKnown RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 USP37Q86T82 979 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 TMEM130Q8N3G9 435 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 C3orf58Q8NDZ4 430 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 TMC2Q8TDI7 906 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 PARD3BQ8TEW8 1205 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 DUSP9Q99956 384 aaKnown RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 TCF25Q9BQ70 676 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 MTMR12Q9C0I1 747 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 ENTPD7Q9NQZ7 604 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 PTPRJQ12913 1337 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 ANO9A1A5B4 782 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 PIRO00625 290 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 TRAPPC3O43617 180 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 CSPG5O95196 566 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 KRT13P13646 458 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 IGFBP6P24592 240 aaPredicted RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 CT47A1Q5JQC4 288 aaPredicted RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 CD300LGQ6UXG3 332 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 TMC7Q7Z402 723 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 RNF168Q8IYW5 571 aaPredicted RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 CSGALNACT2Q8N6G5 542 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 C1orf127Q8N9H9 656 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 PLEKHO2Q8TD55 490 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 CEP63Q96MT8 703 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 POP1Q99575 1024 aaKnown RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 HERC2P3Q9BVR0 1158 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 GPR62Q9BZJ7 368 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 NAT10Q9H0A0 1025 aaKnown RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 ZBP1Q9H171 429 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 NGRNQ9NPE2 291 aaKnown RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 ITGA11Q9UKX5 1188 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
PFDN4-201ENST00000371419 PRRC2BQ5JSZ5 2229 aaKnown RBP17.2■□□□□ 0.34
PFDN4-201ENST00000371419 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
PFDN4-201ENST00000371419 FSCN2O14926 492 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 PAX3P23760 479 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 ERCC5P28715 1186 aaPredicted RBP17.19■□□□□ 0.34
PFDN4-201ENST00000371419 IRS1P35568 1242 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 ZNF165P49910 485 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 VAMP7P51809 220 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 AP3M2P53677 418 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 CLDN10P78369 228 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 ENPEPQ07075 957 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 TIGD5Q53EQ6 642 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 FAM84AQ96KN4 292 aa17.19■□□□□ 0.34
PFDN4-201ENST00000371419 PPEF2O14830 753 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 ITGB3P05106 788 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 CTSAP10619 480 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 BRCC3P46736 316 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 RBP5P82980 135 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 BFSP1Q12934 665 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 SMC1AQ14683 1233 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 USP41Q3LFD5 358 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 FAM171A1Q5VUB5 890 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 PLPP4Q5VZY2 271 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 KIAA1841Q6NSI8 718 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 BORCS6Q96GS4 357 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 CHST7Q9NS84 486 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 AGAP1Q9UPQ3 857 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 IKBKBO14920 756 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 FGFR1OPO95684 399 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 CXCL14O95715 111 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 URODP06132 367 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 PNPLA4P41247 253 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 GLUD2P49448 558 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 LILRA4P59901 499 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 MCCD1P59942 119 aaPredicted RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 DLG4P78352 724 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 LRRC52Q8N7C0 313 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 MRPL43Q8N983 215 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 CXorf38Q8TB03 319 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 ZNF516Q92618 1163 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 SUSD3Q96L08 255 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 ZNF560Q96MR9 790 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 MED15Q96RN5 788 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 TTPALQ9BTX7 342 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 SRRTQ9BXP5 876 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 NSUN3Q9H649 340 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 CBX8Q9HC52 389 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 MRPL17Q9NRX2 175 aaKnown RBP17.18■□□□□ 0.34
PFDN4-201ENST00000371419 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 PCDHGC5Q9Y5F6 944 aa17.18■□□□□ 0.34
PFDN4-201ENST00000371419 I3L4J1 428 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 GNA14O95837 355 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 KRT19P08727 400 aa17.17■□□□□ 0.34
PFDN4-201ENST00000371419 CA8P35219 290 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms