RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 MCRS1Q96EZ8 462 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 MFSD1Q9H3U5 465 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 MRPL17Q9NRX2 175 aaKnown RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 MAN1B1Q9UKM7 699 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 DDX60LQ5H9U9 1706 aaKnown RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 KIAA1551Q9HCM1 1747 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CAPN9O14815 690 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 HCRTO43612 131 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 TRAPPC3O43617 180 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 TSPAN1O60635 241 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 GRAP2O75791 330 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 LRG1P02750 347 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 KNOP1Q1ED39 458 aaKnown RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 MPZL3Q6UWV2 235 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 C1orf186Q6ZWK4 172 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 UNC13DQ70J99 1090 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 ECHDC2Q86YB7 292 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 MIB1Q86YT6 1006 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 TSPY26PQ9H489 355 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 DHX33Q9H6R0 707 aaKnown RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 TMEM206Q9H813 350 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 IRAK4Q9NWZ3 460 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 MIOSQ9NXC5 875 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 SPG21Q9NZD8 308 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 TBX21Q9UL17 535 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 Q9Y3F1 56 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 TTLL3Q9Y4R7 772 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 APC2O95996 2303 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CYP3A7-CYP3A51PA0A087WV96 503 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 ABHD14A-ACY1A0A1B0GW23 586 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 SOX1O00570 391 aaPredicted RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 NRP1O14786 923 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CKMP06732 381 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 GAP43P17677 238 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CYP3A7P24462 503 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CCDC142Q17RM4 750 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 CES5AQ6NT32 575 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 TMEM270Q6UE05 265 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 MOXD1Q6UVY6 613 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 ACOT1Q86TX2 421 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 RDM1Q8NG50 284 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 SLC22A17Q8WUG5 538 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 UBE2TQ9NPD8 197 aaPredicted RBP7.54□□□□□ -1.2
USP1-202ENST00000371146 TRPM7Q96QT4 1865 aa7.54□□□□□ -1.2
USP1-202ENST00000371146 H0YCG3 227 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 AGRPO00253 132 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 PPEF2O14830 753 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ITGB1P05556 798 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 FAM200BP0CF97 657 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 PRPHP41219 470 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 DUSP4Q13115 394 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 SLC39A12Q504Y0 691 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 CCDC157Q569K6 752 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 WSCD1Q658N2 575 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ANKRD40Q6AI12 368 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 SLFN12LQ6IEE8 588 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 SCYL2Q6P3W7 929 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ZNF720Q7Z2F6 126 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 SRGAP1Q7Z6B7 1085 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 GPD1LQ8N335 351 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 GPT2Q8TD30 523 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 FTHL17Q9BXU8 183 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 C1orf112Q9NSG2 853 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 LMBRD1Q9NUN5 540 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 STK24Q9Y6E0 443 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ZSWIM8A7E2V4 1837 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 NBASA2RRP1 2371 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 PODXLO00592 558 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 OGTO15294 1046 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ATF7P17544 494 aaPredicted RBP7.53□□□□□ -1.2
USP1-202ENST00000371146 ABCB4P21439 1286 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 MYL6P60660 151 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 TSPY1Q01534 308 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 YWHAHQ04917 246 aaPredicted RBP7.53□□□□□ -1.2
USP1-202ENST00000371146 DDR2Q16832 855 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 GJB7Q6PEY0 223 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 C16orf59Q7L2K0 433 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 TMEM173Q86WV6 379 aaPredicted RBP7.53□□□□□ -1.2
USP1-202ENST00000371146 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 THEM5Q8N1Q8 247 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 UBA3Q8TBC4 463 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 HPDLQ96IR7 371 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ATXN3LQ9H3M9 355 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 ACP6Q9NPH0 428 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 YBX2Q9Y2T7 364 aaKnown RBP7.53□□□□□ -1.2
USP1-202ENST00000371146 MYH7BA7E2Y1 1941 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 SMIM28A0A1B0GU29 152 aa7.53□□□□□ -1.2
USP1-202ENST00000371146 PSMC2P35998 433 aaKnown RBP7.53□□□□□ -1.2
USP1-202ENST00000371146 RWDD2BP57060 319 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms