RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 POLR3BQ9NW08 1133 aaPredicted RBP11.55□□□□□ -0.56
TUBE1-201ENST00000368657 OBP2AQ9NY56 170 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 SNTG2Q9NY99 539 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 NXF1Q9UBU9 619 aaKnown RBP11.55□□□□□ -0.56
TUBE1-201ENST00000368657 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 CDY1Q9Y6F8 540 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 NCANO14594 1321 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 A0A0D9SFI3 127 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 SLC28A2O43868 658 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 ABLIM3O94929 683 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 SYPP08247 313 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 GP1BBP13224 206 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 BCKDHBP21953 392 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 AXLP30530 894 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 CCR10P46092 362 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 EPHA5P54756 1037 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 PEAR1Q5VY43 1037 aaPredicted RBP11.54□□□□□ -0.56
TUBE1-201ENST00000368657 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
TUBE1-201ENST00000368657 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 TCEAL8Q8IYN2 117 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 GSTCDQ8NEC7 633 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 TSTD1Q8NFU3 115 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 PTCD2Q8WV60 388 aaKnown RBP11.54□□□□□ -0.56
TUBE1-201ENST00000368657 RABGGTAQ92696 567 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 LZTS2Q9BRK4 669 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
TUBE1-201ENST00000368657 NIFKQ9BYG3 293 aaKnown RBP11.54□□□□□ -0.56
TUBE1-201ENST00000368657 THG1LQ9NWX6 298 aaKnown RBP11.54□□□□□ -0.56
TUBE1-201ENST00000368657 PILRBQ9UKJ0 227 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 SAMM50Q9Y512 469 aa11.54□□□□□ -0.56
TUBE1-201ENST00000368657 ARHGAP33O14559 1287 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 MYL4P12829 197 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ATF2P15336 505 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 IL12RB1P42701 662 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 RHDQ02161 417 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 NCBP1Q09161 790 aaKnown RBP11.53□□□□□ -0.56
TUBE1-201ENST00000368657 TUSC3Q13454 348 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 PCBP1Q15365 356 aaKnown RBP eCLIP11.53□□□□□ -0.56
TUBE1-201ENST00000368657 TEAD2Q15562 447 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 IMMTQ16891 758 aaKnown RBP11.53□□□□□ -0.56
TUBE1-201ENST00000368657 LMBRD2Q68DH5 695 aaPredicted RBP11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ARID3BQ8IVW6 561 aaPredicted RBP11.53□□□□□ -0.56
TUBE1-201ENST00000368657 NAXDQ8IW45 347 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 RPLP0P6Q8NHW5 317 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 CCDC26Q8TAB7 109 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 CCDC51Q96ER9 411 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ZFYVE19Q96K21 471 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 NLRP4Q96MN2 994 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 MAP3K14Q99558 947 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 JPH2Q9BR39 696 aaPredicted RBP11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ZNF577Q9BSK1 485 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 DCTPP1Q9H773 170 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 CAPN10Q9HC96 672 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 KCNK4Q9NYG8 393 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
TUBE1-201ENST00000368657 ATMQ13315 3056 aa11.52□□□□□ -0.56
TUBE1-201ENST00000368657 ERICH2A1L162 156 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 MAFO75444 373 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-201ENST00000368657 EGFP01133 1207 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 FGFR3P22607 806 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 PRKCEQ02156 737 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 LYSMD4Q5XG99 296 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 DAGLBQ8NCG7 672 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 HASPINQ8TF76 798 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 CNOT6LQ96LI5 555 aaKnown RBP11.52□□□□□ -0.57
TUBE1-201ENST00000368657 ARID3AQ99856 593 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 PAAF1Q9BRP4 392 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 TPSD1Q9BZJ3 242 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
TUBE1-201ENST00000368657 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
TUBE1-201ENST00000368657 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 WDR64B1ANS9 1081 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 HLA-EP13747 358 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 GJA1P17302 382 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 PTGER3P43115 390 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 TNK2Q07912 1038 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 SERINC3Q13530 473 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
TUBE1-201ENST00000368657 NBR1Q14596 966 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 SLC8B1Q6J4K2 584 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 NOTUMQ6P988 496 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 CATIPQ7Z7H3 387 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 OLIG1Q8TAK6 271 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 BPIFB1Q8TDL5 484 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 BAP1Q92560 729 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
TUBE1-201ENST00000368657 SPACA7Q96KW9 195 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 LRRC3BQ96PB8 259 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 CEP89Q96ST8 783 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 EIF2AQ9BY44 585 aaKnown RBP11.51□□□□□ -0.57
TUBE1-201ENST00000368657 CSRNP2Q9H175 543 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 ANKMY1Q9P2S6 941 aa11.51□□□□□ -0.57
TUBE1-201ENST00000368657 MAFFQ9ULX9 164 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms