RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 LRRIQ3A6PVS8 624 aaPredicted RBP13.67□□□□□ -0.22
EFNA1-201ENST00000368406 KRT19P08727 400 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 EEF1GP26641 437 aaKnown RBP13.67□□□□□ -0.22
EFNA1-201ENST00000368406 PBX3P40426 434 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 OR1G1P47890 313 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 TUSC3Q13454 348 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 DUOXA2Q1HG44 320 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 XKR4Q5GH76 650 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 ALKAL1Q6UXT8 129 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 EFCAB13Q8IY85 973 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 MICALL1Q8N3F8 863 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
EFNA1-201ENST00000368406 IGSF21Q96ID5 467 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 ZMAT2Q96NC0 199 aaKnown RBP13.67□□□□□ -0.22
EFNA1-201ENST00000368406 POP1Q99575 1024 aaKnown RBP13.67□□□□□ -0.22
EFNA1-201ENST00000368406 CXCL16Q9H2A7 254 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 TLR9Q9NR96 1032 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 TUBGCP4Q9UGJ1 667 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 PLXNA4Q9HCM2 1894 aa13.67□□□□□ -0.22
EFNA1-201ENST00000368406 MEFVO15553 781 aaPredicted RBP13.66□□□□□ -0.22
EFNA1-201ENST00000368406 NCK2O43639 380 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 B4GALT3O60512 393 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 SLC11A1P49279 550 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 AP3M2P53677 418 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 WNT7BP56706 349 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 DLG4P78352 724 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 TRPC3Q13507 836 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 TCP11X2Q5H9J9 407 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 DDX53Q86TM3 631 aaKnown RBP13.66□□□□□ -0.22
EFNA1-201ENST00000368406 PPM1EQ8WY54 764 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 UROC1Q96N76 676 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
EFNA1-201ENST00000368406 GOLGA2P5Q9HBQ8 144 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 NGRNQ9NPE2 291 aaKnown RBP13.66□□□□□ -0.22
EFNA1-201ENST00000368406 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 DPP3Q9NY33 737 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 PTPRJQ12913 1337 aa13.66□□□□□ -0.22
EFNA1-201ENST00000368406 NT5C1B-RDH14C9J2C7 533 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 NRP1O14786 923 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 FSCN2O14926 492 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
EFNA1-201ENST00000368406 AFPP02771 609 aaKnown RBP13.65□□□□□ -0.22
EFNA1-201ENST00000368406 GCLMP48507 274 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 MXI1P50539 228 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 GUCY2FP51841 1108 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 MYL7Q01449 175 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 CETN1Q12798 172 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 COL19A1Q14993 1142 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 IQCB1Q15051 598 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 CDKAL1Q5VV42 579 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
EFNA1-201ENST00000368406 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 PLEKHO2Q8TD55 490 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 PPP2R3CQ969Q6 453 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 FAM84AQ96KN4 292 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 TAB2Q9NYJ8 693 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 ITGA11Q9UKX5 1188 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 COG5Q9UP83 839 aa13.65□□□□□ -0.22
EFNA1-201ENST00000368406 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.22
EFNA1-201ENST00000368406 PODXLO00592 558 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 SERPINC1P01008 464 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 ITGB3P05106 788 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 CYP3A5P20815 502 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 MARSP56192 900 aaKnown RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 ERVFC1P60507 584 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 ENPEPQ07075 957 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 BMS1Q14692 1282 aaKnown RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 NCAPHQ15003 741 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 NAB2Q15742 525 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 MAN2A1Q16706 1144 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 TCEAL5Q5H9L2 206 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 TRIM59Q8IWR1 403 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 MICAL1Q8TDZ2 1067 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 COLEC11Q9BWP8 271 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 IMPG2Q9BZV3 1241 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 TMEM8AQ9HCN3 771 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 CACNG4Q9UBN1 327 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 ATG2AQ2TAZ0 1938 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 EFEMP2O95967 443 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 GTF2H1P32780 548 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 IRS1P35568 1242 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 CLCNKBP51801 687 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 SOX4Q06945 474 aaPredicted RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 MYO1EQ12965 1108 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 KRT31Q15323 416 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 SKIV2LQ15477 1246 aaKnown RBP13.64□□□□□ -0.23
EFNA1-201ENST00000368406 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 KRT39Q6A163 491 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 TRAPPC11Q7Z392 1133 aa13.64□□□□□ -0.23
EFNA1-201ENST00000368406 IRF2BP1Q8IU81 584 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms