RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 TCRBV5S2A0A599 114 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 ALG1L2C9J202 215 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 SCDO00767 359 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 HIP1RO75146 1068 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 LTFP02788 710 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 GNAT2P19087 354 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 CTGFP29279 349 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 GUCY1A2P33402 732 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 GCLCP48506 637 aaPredicted RBP9.13□□□□□ -0.95
YBX3-204ENST00000366290 EPHA5P54756 1037 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 ABCB5Q2M3G0 1257 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 SLC4A8Q2Y0W8 1093 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 CPZQ66K79 652 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 CTR9Q6PD62 1173 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 GADL1Q6ZQY3 521 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.13□□□□□ -0.95
YBX3-204ENST00000366290 SPATS2Q86XZ4 545 aaKnown RBP9.13□□□□□ -0.95
YBX3-204ENST00000366290 TRIM48Q8IWZ4 208 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 RILPL2Q969X0 211 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 FAM227BQ96M60 508 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
YBX3-204ENST00000366290 ARHGAP39Q9C0H5 1083 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 KIAA1683Q9H0B3 1180 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 IL25Q9H293 177 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 EMC7Q9NPA0 242 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 SPTLC3Q9NUV7 552 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 KLHL14Q9P2G3 628 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 ARPP21Q9UBL0 812 aaPredicted RBP9.13□□□□□ -0.95
YBX3-204ENST00000366290 CPA4Q9UI42 421 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 HCFC2Q9Y5Z7 792 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 SLC4A4Q9Y6R1 1079 aa9.13□□□□□ -0.95
YBX3-204ENST00000366290 A0A0D9SFI3 127 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 FOXP2O15409 715 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 GPAA1O43292 621 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 CLASP2O75122 1294 aaKnown RBP9.12□□□□□ -0.95
YBX3-204ENST00000366290 CYP2D6P10635 497 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 MAPKAPK2P49137 400 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 USP14P54578 494 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 PRR5P85299 388 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 TMPRSS15P98073 1019 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 KIF22Q14807 665 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 SLC9A5Q14940 896 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 FAM110CQ1W6H9 321 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 PLEKHN1Q494U1 663 aaPredicted RBP9.12□□□□□ -0.95
YBX3-204ENST00000366290 IRF2BP1Q8IU81 584 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 SMCR8Q8TEV9 937 aaPredicted RBP9.12□□□□□ -0.95
YBX3-204ENST00000366290 CLEC4DQ8WXI8 215 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 TSPAN17Q96FV3 270 aa9.12□□□□□ -0.95
YBX3-204ENST00000366290 TYW1Q9NV66 732 aaKnown RBP9.12□□□□□ -0.95
YBX3-204ENST00000366290 RLFQ13129 1914 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 DVL2O14641 736 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 CHMLP26374 656 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 FXR1P51114 621 aaKnown RBP eCLIP9.11□□□□□ -0.95
YBX3-204ENST00000366290 GUCY2FP51841 1108 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 ZNF174Q15697 407 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 ATP13A4Q4VNC1 1196 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 CCDC129Q6ZRS4 1044 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 TMEM179Q6ZVK1 233 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 NECAB2Q7Z6G3 386 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 ZNF589Q86UQ0 364 aaPredicted RBP9.11□□□□□ -0.95
YBX3-204ENST00000366290 FERMT3Q86UX7 667 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 C11orf74Q86VG3 221 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 EFHBQ8N7U6 833 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 ARRDC4Q8NCT1 418 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 DLG3Q92796 817 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 CCDC17Q96LX7 622 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 EPB41L4AQ9HCS5 686 aaPredicted RBP9.11□□□□□ -0.95
YBX3-204ENST00000366290 TMOD4Q9NZQ9 345 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 MORF4L1Q9UBU8 362 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 SRRDQ9UH36 339 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 B3GALT1Q9Y5Z6 326 aa9.11□□□□□ -0.95
YBX3-204ENST00000366290 PARP14Q460N5 1801 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 CYP2D7A0A087X1C5 515 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 FAM90A27PA6NNH2 459 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 SMIM22K7EJ46 135 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 PDGFRBP09619 1106 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 PTPN1P18031 435 aaKnown RBP9.1□□□□□ -0.95
YBX3-204ENST00000366290 HOXD10P28358 340 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 GJA4P35212 333 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 PSMC4P43686 418 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 KIF11P52732 1056 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 YBX1P67809 324 aaKnown RBP9.1□□□□□ -0.95
YBX3-204ENST00000366290 GRIN1Q05586 938 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 SEPT2Q15019 361 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 SEC23AQ15436 765 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 BTBD8Q5XKL5 378 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 ZC3H14Q6PJT7 736 aaKnown RBP9.1□□□□□ -0.95
YBX3-204ENST00000366290 SIAH1Q8IUQ4 282 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 KIAA1958Q8N8K9 716 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 SLC44A5Q8NCS7 719 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 ACER1Q8TDN7 264 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 FAM168AQ92567 244 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 DYNLL2Q96FJ2 89 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 HELLSQ9NRZ9 838 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 KCNH7Q9NS40 1196 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 RIC8BQ9NVN3 520 aa9.1□□□□□ -0.95
YBX3-204ENST00000366290 SLC5A4Q9NY91 659 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms