RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 TDP1Q9NUW8 608 aa3.07□□□□□ -1.92
RNU4-56P-201ENST00000364700 FAM184BQ9ULE4 1060 aa3.07□□□□□ -1.92
RNU4-56P-201ENST00000364700 PCDHA3Q9Y5H8 950 aa3.07□□□□□ -1.92
RNU4-56P-201ENST00000364700 CAPN8A6NHC0 703 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 GRXCR1A8MXD5 290 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 PEX11BO96011 259 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 KRT18P05783 430 aaKnown RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 IL2RBP14784 551 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 CASP5P51878 434 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 APBA1Q02410 837 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 HNRNPA0Q13151 305 aaKnown RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 BMT2Q1RMZ1 405 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 COBLL1Q53SF7 1204 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 METTL24Q5JXM2 366 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 THEMIS2Q5TEJ8 643 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SPTY2D1Q68D10 685 aaPredicted RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 IL31Q6EBC2 164 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 FAM180AQ6UWF9 173 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SYT12Q8IV01 421 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 ULK2Q8IYT8 1036 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 ZNF808Q8N4W9 903 aaPredicted RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 CAMKK1Q8N5S9 505 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SAMD3Q8N6K7 520 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 RNF152Q8N8N0 203 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 OR52N2Q8NGI0 321 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 STON2Q8WXE9 905 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SLC35A4Q96G79 324 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 ZNF512Q96ME7 567 aaPredicted RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 AGAP2Q99490 1192 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 PCGF6Q9BYE7 350 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 TRIM54Q9BYV2 358 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 NELFAQ9H3P2 528 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 FAM204AQ9H8W3 233 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SMURF2Q9HAU4 748 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 KMT5AQ9NQR1 393 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 LMBRD1Q9NUN5 540 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 KLHL11Q9NVR0 708 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 PNPOQ9NVS9 261 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SIDT1Q9NXL6 827 aaKnown RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 STK32BQ9NY57 414 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 VSX1Q9NZR4 365 aaPredicted RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 FNIP2Q9P278 1114 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 PUF60Q9UHX1 559 aaKnown RBP3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 PHTF1Q9UMS5 762 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 SH3BP1Q9Y3L3 701 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 DMRT1Q9Y5R6 373 aa3.06□□□□□ -1.92
RNU4-56P-201ENST00000364700 USP19O94966 1318 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 TBKBP1A7MCY6 615 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 GOLIM4O00461 696 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 TBX3O15119 743 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 GRM6O15303 877 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 RAMP2O60895 175 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 SLC43A1O75387 559 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 ARIH2O95376 493 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 CD1AP06126 327 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 MYF5P13349 255 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 EN2P19622 333 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 PEX2P28328 305 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 HIBADHP31937 336 aaKnown RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 MSX2P35548 267 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 PIK3CBP42338 1070 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 NEK3P51956 506 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 RABGGTBP53611 331 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 GPSM2P81274 684 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 HTRA4P83105 476 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 HHEXQ03014 270 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 SLFN5Q08AF3 891 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 FOXL1Q12952 345 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 KIF22Q14807 665 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 POLD3Q15054 466 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 PABPC1LQ4VXU2 614 aaKnown RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 RNF220Q5VTB9 566 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 NAIF1Q69YI7 327 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 DPY19L2P1Q6NXN4 242 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 DRICH1Q6PGQ1 229 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 FAM111BQ6SJ93 734 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 KSR2Q6VAB6 950 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 TOGARAM2Q6ZUX3 1019 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 APBB1IPQ7Z5R6 666 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 MDGA1Q8NFP4 955 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 LRTOMTQ8WZ04 291 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 GJA10Q969M2 543 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 VOPP1Q96AW1 172 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 APIPQ96GX9 242 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 MSLNLQ96KJ4 702 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 NEU1Q99519 415 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 MRI1Q9BV20 369 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 C1orf43Q9BWL3 253 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 BTBD1Q9H0C5 482 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 C11orf54Q9H0W9 315 aaPredicted RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 C12orf65Q9H3J6 166 aaKnown RBP3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 WDCPQ9H6R7 721 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 FBXO34Q9NWN3 711 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 PLA2G3Q9NZ20 509 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 CEP72Q9P209 647 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 ABCF2Q9UG63 623 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 MED16Q9Y2X0 877 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 PCDHGB6Q9Y5F9 930 aa3.05□□□□□ -1.92
RNU4-56P-201ENST00000364700 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
RNU4-56P-201ENST00000364700 CCDC78A2IDD5 438 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms